ggKbase home page

rifcsphigho2_01_scaffold_1364_35

Organism: RIFCSPHIGHO2_01_FULL_Archaea_Woesearchaeota_39_22

partial RP 35 / 55 MC: 2 BSCG 5 / 51 ASCG 30 / 38
Location: comp(30758..31012)

Top 3 Functional Annotations

Value Algorithm Source
rpoH; DNA-directed RNA polymerase subunit H (EC:2.7.7.6) Tax=RBG_16_Bathyarchaeota_48_13_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 44.0
  • Coverage: 84.0
  • Bit_score: 79
  • Evalue 1.90e-12
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000373033A similarity UNIREF
DB: UNIREF100
  • Identity: 48.8
  • Coverage: 80.0
  • Bit_score: 81
  • Evalue 4.80e-13
DNA-directed RNA polymerase, subunit H similarity KEGG
DB: KEGG
  • Identity: 44.6
  • Coverage: 83.0
  • Bit_score: 75
  • Evalue 9.60e-12

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RBG_16_Bathyarchaeota_48_13_curated → Bathyarchaeota → Archaea

Sequences

DNA sequence
Length: 255
ATGGTAGAAAAAAAGGAAGCCGCATTTAACATTTTCAAACATAATCTTGTACCAAAGTATACGAAACTTAAACCTGAAGAATTAAATGGGTTATTTCAACAATATAATATTTCACCAAAACAACTTCCAAAACTTTGTATGAAAGACCCGGTTGCAAAGGAACTTGAACTACAACCTGGCGATGTTGTTAAGATAATCTCAAAGAGTCAAACAGTCAAAGAAAGAGTTTTTTATAGGGTGGTCATAAGTGGATAA
PROTEIN sequence
Length: 85
MVEKKEAAFNIFKHNLVPKYTKLKPEELNGLFQQYNISPKQLPKLCMKDPVAKELELQPGDVVKIISKSQTVKERVFYRVVISG*