ggKbase home page

rifcsphigho2_01_scaffold_2823_17

Organism: RIFCSPHIGHO2_01_FULL_Archaea_Woesearchaeota_39_22

partial RP 35 / 55 MC: 2 BSCG 5 / 51 ASCG 30 / 38
Location: comp(14150..15379)

Top 3 Functional Annotations

Value Algorithm Source
Replication factor C large subunit id=5799900 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized similarity UNIREF
DB: UNIREF100
  • Identity: 41.3
  • Coverage: 419.0
  • Bit_score: 301
  • Evalue 1.10e-78
Replication factor C large subunit {ECO:0000256|HAMAP-Rule:MF_01508, ECO:0000256|SAAS:SAAS00009874}; Short=RFC large subunit {ECO:0000256|HAMAP-Rule:MF_01508};; Clamp loader large subunit {ECO:0000256 similarity UNIPROT
DB: UniProtKB
  • Identity: 41.1
  • Coverage: 418.0
  • Bit_score: 301
  • Evalue 1.50e-78
AAA ATPase central domain protein similarity KEGG
DB: KEGG
  • Identity: 36.8
  • Coverage: 421.0
  • Bit_score: 263
  • Evalue 9.30e-68

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

archaeon GW2011_AR15 → Archaea

Sequences

DNA sequence
Length: 1230
ATGTGGACAGAAAAGTATCGGCCTAGAAAAGAAGAAGAGGTCATTGGACAAGAAAGGCAGAAGGAAGTGATAAAAAGGGCAATAGAAGGGTGGAATCAAAATTCAAAGCCACTATTACTGCATGGCCCGCCAGGGGTAGGAAAAACATCTTACATCCATGCGCTAGCAAAACAAAATCAATATGAAATTCTTGAAGTTAATGCATCAGATACAAGAAGCAAAGAGAACCTACATAGAATTATAGGACAGGCACTAGCGCAACGCTCCCTTTTTGGGGGTAAAAAACTCATTCTTATTGATGAAGTAGACGGAATTGGAGGAAGTAAAGAAAGGGGAGGTATGGAGGAGCTCATAAAGCTATTGGAAAATCCAAGCACACCTGTGGTTTTAACGGCAAATGATATAGAAGATGAAAAGATGGAAAAGCTTAGAACAAAGATAAGAGAAGTTCCGTTTGAAAGATTAGAAACTGCAAAAATAGCGGCACTTCTCTGGAAAATAGTAAAAAAAGAAAATATAAAGGCTGATGAAAAAAGTGTCAAAAAGATAGCTAGGCAGAGCCGGGGAGACGTTAGGGGAGCAATAACAGATCTCCAAACAAGTAAAAATGAAGTTGGAGAGATTGAAGCATTGGACGAAGAAACAACAAGAAGGCAAAAAGAAGAAATAAAGCAAGCAGTGAAGGTTGTCCTGAAAACAAAGAAGGCTACTATTGCGCGCCAAGCAACAGAAAACATCGATCAAGACATTATAGATCTATCAAGAAAGGTGATAGGCCCAGTAATCTTTGGAAATGACGACGCCTATGGATATTGGATAGAAGAAAATATTCCTAAAGAGTATGACAAAGGAGACATTGAAAAAGCGTTTGAAGTATTGAGCAGGGCTGATGTGTTTCGCGGAAGAATAATGAGAAGGCAATATTATGGATATCTCACAACAATTCAAATGATGCTCACTGCAGGGGTAGCTATATCCAAATCAGAGAGAAGTGAAGCTCAAGTAAGGTACAGCAAAACAGAGCGTTCACCGAAACAAAACAAAAAATTGTGGTGGCTTGTAACAAAAAAAAGAGAAGCAATTGTAGGGAAGATAGCGCACAGTGTACATAGCTCGAAAAGAAAGGTCAAGGAAGAGTTTGGCATGTATAAACAAATAATAAAAGAAGACCCATTAATCGCCGAGAAAGTAAGACTTAGTGAGGATGAAGTGAACTATTTAAGAAAATAA
PROTEIN sequence
Length: 410
MWTEKYRPRKEEEVIGQERQKEVIKRAIEGWNQNSKPLLLHGPPGVGKTSYIHALAKQNQYEILEVNASDTRSKENLHRIIGQALAQRSLFGGKKLILIDEVDGIGGSKERGGMEELIKLLENPSTPVVLTANDIEDEKMEKLRTKIREVPFERLETAKIAALLWKIVKKENIKADEKSVKKIARQSRGDVRGAITDLQTSKNEVGEIEALDEETTRRQKEEIKQAVKVVLKTKKATIARQATENIDQDIIDLSRKVIGPVIFGNDDAYGYWIEENIPKEYDKGDIEKAFEVLSRADVFRGRIMRRQYYGYLTTIQMMLTAGVAISKSERSEAQVRYSKTERSPKQNKKLWWLVTKKREAIVGKIAHSVHSSKRKVKEEFGMYKQIIKEDPLIAEKVRLSEDEVNYLRK*