ggKbase home page

rifcsplowo2_01_scaffold_3267_22

Organism: RIFCSPLOWO2_01_FULL_Archaea_Woesearchaeota_34_320

near complete RP 35 / 55 MC: 3 BSCG 5 / 51 ASCG 31 / 38 MC: 1
Location: 13308..15110

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase, subunit b' (EC:2.7.7.6); K03044 DNA-directed RNA polymerase subunit B' [EC:2.7.7.6] Tax=AR17 similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 600.0
  • Bit_score: 1194
  • Evalue 0.0
DNA-directed RNA polymerase n=1 Tax=Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S) RepID=E3GYR9_METFV id=5103778 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome similarity UNIREF
DB: UNIREF100
  • Identity: 68.1
  • Coverage: 601.0
  • Bit_score: 860
  • Evalue 8.90e-247
DNA-directed RNA polymerase similarity KEGG
DB: KEGG
  • Identity: 68.0
  • Coverage: 600.0
  • Bit_score: 860
  • Evalue 2.50e-247

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

AR17 → Woesearchaeaota → DPANN → Archaea

Sequences

DNA sequence
Length: 1803
ATGACTGATGTATATTTAGATGAGAAATATATTGGGACTATAGAACATCCAAAAGATTTTGTAAAAAATTTCATTGAAGAGAGAAGAAAACAAAAACTTCACACAACAATAAATATTAATTATGAATCAGAATTTGATGAGGTTTCTATTTTTACTGCAACAGGAAGAGTACGAAGACCATTAATCATTGTTGAAAATGGAAAAGCTCTCCTTACAGATGAACACATGAAAAAATTAGCTTCTAATGATATGAGATGGCAAGACCTCCTTGAACAAGGAGTTTTAGAATATCTTGATGCAAACGAAGAAGAGAATGCATTAGTTGCTCTTACAGACAAAGATTTGACAAAAGAGCATACACATATGGAAATTGATGCAGTAACAATTTTAGGCCTTATTACTTCTCTTGTTCCATATGCCAACTTTGGACAAAGTTCTCGTCTGAACAGAGGATCCAAAACACAAAAACAAGCTTTAGGTTTATATGCAAGCAATTACTTATTGCGAATGGATACAGATATTAGTATTTTACAATATCCTCAGAGACCAATTGTAAAAACATTTATGCATGATATTTCAAAATATGAAAAACATCCTTCAGGGCAAAATGTAACCATTGCCTTACTCAGCTATGATGGATACAATATGCAAGACGCATTAATTGTCAATGAAGGTTCTATACAAAGAGGCCTAGCACGTTCTTTTTACTTTAGACCATACAATGCAGATGAACTTCGATACCAAGGGGGGCTTATTGATGAAATAGGTGTTCCAGACAAAGAAGTAAAAGCATATAGAACAGAAGAGGACTATCGCTTCCTAGAAGATGATGGAATTGTCTTCCCAGAAGCAAAAGTCAAAGAAGATGATGTTCTTATCGGAAAAACTTCACCTCCAAGATTTTTAGGAGAAATGGAAGAATTTAGTATTGCAGCAAACACACGAAGAGAGAGTTCTATTGCAGTAAAGCATGGGGAACATGGTGTGGTTGATATGGTTGTTCTTACAGAAAATGATGAAGGAAACAAACTTATTCAAATTAGATTAAGAGATTTAAGAATTCCAGAACCAGGAGATAAATTTGCTTCTCGTTACGGACAGAAGGGAGTTATTGGAAGAATTGTTCCACAAGCAGACATGCCTTTTACAACATCAGGTATAGTCCCTGATATTATTTTCTCTCCACACTCTATTCCATCTCGTATGACTATCTCACATTTAATTGAGGTCATTGGTGGAAAAGTAGGAGCACTTGGTGGACGACAAATTGATGGAACGACATTCTCTGCAGAATCAGAAAAAGATTTACGAGCAGAGCTTCTCACATTGGGCTTCAGAGAAAATGGAACAGAAAGAATGTACAATGGAATTACTGGAGAAGAATTCAAATCAAATATTTTTGTTGGAAATATGTATTATCTAAAATTAAAGCACATGGTTGCAAACAAAATGCATGCACGTGCATCAGGAAAAATCCAACTCCTTACACGACAACCTATCGAAGGAAGAAGTGCTGGAGGAGGACTGAGATTAGGAGAGATGGAGAAAGACTGTTTAGTGGCTCATGGAGCATCCTTACTCTTGAAAGAAAGATTTGACTCTGATAAAACAATCCTCCATATCTGTGAAAGCTGTGGTATGGTCGCAATCTTTGACTGGCTCAAAAAACGAGCATCATGTCCTAAGTGTGGCGCAAATGCAGAAATAAACTCTATAGAAATGAGTTACGCATTCAAACTCTTATTGGATGAGTTAAAATCACTTAATATTTATCCAAAAATTAACCTCAAAAACAAATACTAA
PROTEIN sequence
Length: 601
MTDVYLDEKYIGTIEHPKDFVKNFIEERRKQKLHTTININYESEFDEVSIFTATGRVRRPLIIVENGKALLTDEHMKKLASNDMRWQDLLEQGVLEYLDANEEENALVALTDKDLTKEHTHMEIDAVTILGLITSLVPYANFGQSSRLNRGSKTQKQALGLYASNYLLRMDTDISILQYPQRPIVKTFMHDISKYEKHPSGQNVTIALLSYDGYNMQDALIVNEGSIQRGLARSFYFRPYNADELRYQGGLIDEIGVPDKEVKAYRTEEDYRFLEDDGIVFPEAKVKEDDVLIGKTSPPRFLGEMEEFSIAANTRRESSIAVKHGEHGVVDMVVLTENDEGNKLIQIRLRDLRIPEPGDKFASRYGQKGVIGRIVPQADMPFTTSGIVPDIIFSPHSIPSRMTISHLIEVIGGKVGALGGRQIDGTTFSAESEKDLRAELLTLGFRENGTERMYNGITGEEFKSNIFVGNMYYLKLKHMVANKMHARASGKIQLLTRQPIEGRSAGGGLRLGEMEKDCLVAHGASLLLKERFDSDKTILHICESCGMVAIFDWLKKRASCPKCGANAEINSIEMSYAFKLLLDELKSLNIYPKINLKNKY*