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rifcsplowo2_01_scaffold_1520

Search features with annotation key words

Displaying items 1-30 of 48 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_01_scaffold_1520_1
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

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2..157
DNA (156bp) protein (52aa)
Protein containing DUF1814 domain n=1 Tax=sediment metagenome RepID=D9PJC8_9ZZZZ
Protein containing DUF1814 domain Tax=RBG_13_Pacearchaeota_36_9_curated
rifcsplowo2_01_scaffold_1520_2
unknown

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comp(159..593)
DNA (435bp) protein (145aa)

This feature has no annotations

rifcsplowo2_01_scaffold_1520_3

Not on your lists

comp(653..802)
DNA (150bp) protein (50aa)
id=5103013 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Uncharacterized protein {ECO:0000313|EMBL:AJF62294.1}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
rifcsplowo2_01_scaffold_1520_4
AR15, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(777..905)
DNA (129bp) protein (43aa)
id=5800232 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Tax=AR15
rifcsplowo2_01_scaffold_1520_5
unknown

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1034..1279
DNA (246bp) protein (82aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00036FCC27
rifcsplowo2_01_scaffold_1520_6

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comp(1261..2205)
DNA (945bp) protein (315aa)
Transcription initiation factor IIB n=4 Tax=Archaeoglobaceae RepID=TF2B_ARCFU id=5103059 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Transcription initiation factor IIB
Transcription initiation factor IIB {ECO:0000256|HAMAP-Rule:MF_00383}; Short=TFIIB {ECO:0000256|HAMAP-Rule:MF_00383};; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
rifcsplowo2_01_scaffold_1520_7
unknown

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comp(2304..2627)
DNA (324bp) protein (108aa)

This feature has no annotations

rifcsplowo2_01_scaffold_1520_8
unknown

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comp(2676..3050)
DNA (375bp) protein (125aa)
30S ribosomal protein S8e n=2 Tax=Picrophilus torridus (strain ATCC 700027 / DSM 9790 / JCM 10055 / NBRC 100828) RepID=RS8E_PICTO id=5103085 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
30S ribosomal protein S8e n=2 Tax=Picrophilus torridus (strain ATCC 700027 / DSM 9790 / JCM 10055 / NBRC 100828) RepID=RS8E_PICTO Tax=AR20
30S ribosomal protein S8e
rifcsplowo2_01_scaffold_1520_9
Methanothermus fervidus, Methanothermus, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

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comp(3145..4182)
DNA (1038bp) protein (346aa)
Glycosyl transferase family 2 n=1 Tax=Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S) RepID=E3GY86_METFV
family 2 glycosyl transferase
Glycosyl transferase family 2 {ECO:0000313|EMBL:ADP77268.1}; TaxID=523846 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanothermaceae; Methanothermus.;" source="Methanother
rifcsplowo2_01_scaffold_1520_10
CG_Woesearch_02, Woesearchaeota, Archaea

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4409..4684
DNA (276bp) protein (92aa)
Elongation factor 1-beta n=2 Tax=Methanobacterium RepID=K2RST2_METFO id=5103134 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
ef1B; elongation factor 1-beta; K03232 elongation factor 1-beta Tax=CG_Woesearch_02
Elongation factor 1-beta
rifcsplowo2_01_scaffold_1520_11

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comp(4674..5417)
DNA (744bp) protein (248aa)
id=5048311 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Uncharacterized protein {ECO:0000313|EMBL:KHO54029.1}; TaxID=1579376 species="Archaea.;" source="archaeon GW2011_AR18.;"
rifcsplowo2_01_scaffold_1520_12
AR18, Woesearchaeaota, DPANN, Archaea

Not on your lists

5518..6120
DNA (603bp) protein (201aa)
histidine triad protein; K02503 Hit-like protein involved in cell-cycle regulation id=5050659 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
histidine triad protein; K02503 Hit-like protein involved in cell-cycle regulation Tax=AR18
hypothetical protein
rifcsplowo2_01_scaffold_1520_13
Methanocaldococcus vulcanius, Methanocaldococcus, Methanococcales, Methanococci, Euryarchaeota, Archaea

Not on your lists

comp(6113..6634)
DNA (522bp) protein (174aa)
hypothetical protein n=1 Tax=Meiothermus timidus RepID=UPI00035E3AA8
serine/threonine protein kinase
Serine/threonine protein kinase {ECO:0000313|EMBL:ACX72857.1}; TaxID=579137 species="Archaea; Euryarchaeota; Methanococci; Methanococcales; Methanocaldococcaceae; Methanocaldococcus.;" source="Methano
rifcsplowo2_01_scaffold_1520_14

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comp(6681..7529)
DNA (849bp) protein (283aa)
Peptidase A24A prepilin type IV n=1 Tax=Candidatus Parvarchaeum acidophilus ARMAN-5 RepID=D6GUF4_9EURY id=5103136 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Peptidase A24A prepilin type IV
Peptidase A24A prepilin type IV {ECO:0000313|EMBL:AJF62417.1}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
rifcsplowo2_01_scaffold_1520_15

Not on your lists

7563..8600
DNA (1038bp) protein (346aa)
geranylgeranyl reductase id=5050661 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Geranylgeranyl reductase {ECO:0000313|EMBL:KHO53330.1}; TaxID=1579376 species="Archaea.;" source="archaeon GW2011_AR18.;"
Geranylgeranyl reductase
rifcsplowo2_01_scaffold_1520_16

Not on your lists


comp(8724..9737)
DNA (1014bp) protein (338aa)
Protein pelota homolog {ECO:0000256|HAMAP-Rule:MF_01853, ECO:0000256|SAAS:SAAS00004956}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01853, ECO:0000256|SAAS:SAAS00011872};; TaxID=1579373 species="Archaea.;"
Protein pelota homolog id=5800182 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
cell division protein
rifcsplowo2_01_scaffold_1520_17

Not on your lists

9785..10960
DNA (1176bp) protein (392aa)
id=5050665 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Uncharacterized protein {ECO:0000313|EMBL:KHO53334.1}; TaxID=1579376 species="Archaea.;" source="archaeon GW2011_AR18.;"
rifcsplowo2_01_scaffold_1520_18
unknown

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10953..12305
DNA (1353bp) protein (451aa)

This feature has no annotations

rifcsplowo2_01_scaffold_1520_19
unknown

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12337..13224
DNA (888bp) protein (296aa)

This feature has no annotations

rifcsplowo2_01_scaffold_1520_20
AR18, Woesearchaeaota, DPANN, Archaea

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13225..14175
DNA (951bp) protein (317aa)
id=5050668 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Tax=AR18
rifcsplowo2_01_scaffold_1520_21
AR10, Diapherotrites, DPANN, Archaea

Not on your lists

comp(14195..15433)
DNA (1239bp) protein (413aa)
hypothetical protein
hypothetical protein id=5241776 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
hypothetical protein Tax=AR10
rifcsplowo2_01_scaffold_1520_22

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comp(15625..16395)
DNA (771bp) protein (257aa)
Uncharacterized protein n=2 Tax=Methanobacterium RepID=K2QFB8_METFO id=5103144 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJF62425.1}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
rifcsplowo2_01_scaffold_1520_23
AR18, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(16582..17364)
DNA (783bp) protein (261aa)
eif2A; translation initiation factor IF-2 subunit alpha; K03237 translation initiation factor 2 subunit 1 id=5050676 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
eif2A; translation initiation factor IF-2 subunit alpha; K03237 translation initiation factor 2 subunit 1 Tax=AR18
Translation initiation factor 2 subunit alpha
rifcsplowo2_01_scaffold_1520_24
Candidatus Parvarchaeum acidiphilum, Candidatus Parvarchaeum, Parvarchaeota, Archaea

Not on your lists

comp(17367..17549)
DNA (183bp) protein (61aa)
30S ribosomal protein S27e n=1 Tax=Candidatus Parvarchaeum acidiphilum ARMAN-4 RepID=D2EEZ2_9EURY
30S ribosomal protein S27e {ECO:0000256|HAMAP-Rule:MF_00371}; TaxID=662760 species="Archaea; Parvarchaeota; Candidatus Parvarchaeum.;" source="Candidatus Parvarchaeum acidiphilum ARMAN-4.;"
30S ribosomal protein S27e
rifcsplowo2_01_scaffold_1520_25
AR18, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(17546..17857)
DNA (312bp) protein (104aa)
id=5050681 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
LSU ribosomal protein L44E
Tax=AR18
rifcsplowo2_01_scaffold_1520_26
AR18, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(17854..18465)
DNA (612bp) protein (204aa)
hypothetical protein
id=5050691 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Tax=AR18
rifcsplowo2_01_scaffold_1520_27
RBG_13_Pacearchaeota_33_26_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

comp(18522..19721)
DNA (1200bp) protein (400aa)
2,3-bisphosphoglycerate-independent phosphoglycerate mutase (EC:5.4.2.1); K15635 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.1] Tax=RBG_13_Pacearchaeota_33_26_curated
2,3-bisphosphoglycerate-independent phosphoglycerate mutase (EC:5.4.2.1)
2,3-bisphosphoglycerate-independent phosphoglycerate mutase (Phosphoglyceromutase) n=1 Tax=sediment metagenome RepID=D9PEW1_9ZZZZ
rifcsplowo2_01_scaffold_1520_28
AR18, Woesearchaeaota, DPANN, Archaea

Not on your lists

19759..20691
DNA (933bp) protein (311aa)
tRNA pseudouridine synthase D TruD; K06176 tRNA pseudouridine13 synthase [EC:5.4.99.27] id=5050697 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
tRNA pseudouridine synthase D TruD; K06176 tRNA pseudouridine13 synthase [EC:5.4.99.27] Tax=AR18
tRNA pseudouridine 13 synthase
rifcsplowo2_01_scaffold_1520_29
unknown

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20714..21598
DNA (885bp) protein (295aa)

This feature has no annotations

rifcsplowo2_01_scaffold_1520_30

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21633..22667
DNA (1035bp) protein (345aa)
Marine sediment metagenome DNA, contig: S03H2_L00267 {ECO:0000313|EMBL:GAH34806.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
ftsY; signal recognition particle receptor FtsY; K03110 fused signal recognition particle receptor id=5050700 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Signal recognition particle GTPase
Displaying items 1-30 of 48 in total

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