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rifcsplowo2_01_scaffold_2561_30

Organism: RIFCSPLOWO2_01_FULL_Archaea_Woesearchaeota_45_21

partial RP 36 / 55 MC: 5 BSCG 6 / 51 ASCG 30 / 38 MC: 2
Location: comp(20402..21553)

Top 3 Functional Annotations

Value Algorithm Source
truD; tRNA pseudouridine synthase D (EC:5.4.99.12) similarity KEGG
DB: KEGG
  • Identity: 37.7
  • Coverage: 395.0
  • Bit_score: 262
  • Evalue 1.90e-67
Probable tRNA pseudouridine synthase D 2 {ECO:0000255|HAMAP-Rule:MF_01082}; EC=5.4.99.27 {ECO:0000255|HAMAP-Rule:MF_01082};; tRNA pseudouridine(13) synthase {ECO:0000255|HAMAP-Rule:MF_01082}; tRNA pse similarity UNIPROT
DB: UniProtKB
  • Identity: 37.7
  • Coverage: 395.0
  • Bit_score: 262
  • Evalue 9.60e-67
Probable tRNA pseudouridine synthase D 2 n=1 Tax=Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) RepID=TRUD2_METJA similarity UNIREF
DB: UNIREF100
  • Identity: 37.7
  • Coverage: 395.0
  • Bit_score: 262
  • Evalue 6.90e-67

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Taxonomy

Methanocaldococcus jannaschii → Methanocaldococcus → Methanococcales → Methanococci → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 1152
ATGAAACTCCGCCAAAAGCCTGATGATTTTCTTGTCGAGGAGCTGCCGTTGCATGAATTAAAGCAAGAGGGTAAGTACGCAGTCTACAAACTCCAAAAAGTTGGCATGACTACCTTTGCGGCAGAGAAAGTCCTCGCCGCCCATTGCGGGGTGCAGTTCAAGCACATTGGTTTTGCAGGTTTGAAAGACACTCACGCACGTACCACTCAGTATTTTTCGGTTGAGACAAACAATCCTGAATCAGGGAACTTTAAGGAGCGTAATGTGACGAGCGAACTCGTCGGTTTTCTTGACCAGTCGATACGAACCGGAGACTTGAAGGGGAACCGTTTCATCATCACCGTCCGCGACTTGCGCGATGCCGACATTGAGCGTGTCGAACAGCATGTGGAACAGGTCGCACTAGGTATTCCTAATTATTTTGATAGCCAGCGTTTTGGTTCACTCAAAGGGGTCAAGGGTTTTATCGCAAAGGATGTGCTGAAAGGAGATTACGAATCTGCTGTCAAAAAGATTATCACTGCGACTACGCGCCACCAGAAAGCGACCATCCGGAACATGCGTAAGTTCATCCTTCAAAATTGGGGCAAGTGGGACCTTTGTTTTGATGAAGTTAAAAAACTGGGCCTTGACCGCACTGTTGAAGGCGCCTTGGTCATCCATCTTGCAAATGACCCGCAGGATTTCAAGGGCGCGTTCAGAAGGACGTTCAAGGGCATCCGCGAGATTTTTTTCTCAGCATACCAATCGTATGTTTGGAATGAATGTATAAAACAGGTCGTGCGGCAGAACAGCAAAGAAGTTTATAGTGTTCCATATGAAGCTGGCAAGTTAGTGTTTCCAAGGAAATGGAATAACGGAGCCCAGCTTGGCACTTTTCCTCTTGTCGCGCCCGATGTTCAAGGAGCTGCTGAGCAGATGCAGATTCTTGCAAATGTTTTGAAAATTGAAAAGATGACATTGCCAGAATTCGCAACCGATGAGCACATTCTGGTCCCTCGTCAAAGAGAGATAATGATTGTTCCGCAGGAACTTGAGATTGAAGCAGGTGATGATGAGTTGAACAAGCGCAAAAAGAAAGTCGTGCTGAAGTTCTCGCTTCCTAAAGGGGCGTACGCCACGATTGTGACGAAATCCTTGTTTGGACAGTAG
PROTEIN sequence
Length: 384
MKLRQKPDDFLVEELPLHELKQEGKYAVYKLQKVGMTTFAAEKVLAAHCGVQFKHIGFAGLKDTHARTTQYFSVETNNPESGNFKERNVTSELVGFLDQSIRTGDLKGNRFIITVRDLRDADIERVEQHVEQVALGIPNYFDSQRFGSLKGVKGFIAKDVLKGDYESAVKKIITATTRHQKATIRNMRKFILQNWGKWDLCFDEVKKLGLDRTVEGALVIHLANDPQDFKGAFRRTFKGIREIFFSAYQSYVWNECIKQVVRQNSKEVYSVPYEAGKLVFPRKWNNGAQLGTFPLVAPDVQGAAEQMQILANVLKIEKMTLPEFATDEHILVPRQREIMIVPQELEIEAGDDELNKRKKKVVLKFSLPKGAYATIVTKSLFGQ*