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rifcsplowo2_01_scaffold_1369

Search features with annotation key words

Displaying items 31-60 of 81 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_01_scaffold_1369_31
unknown

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20182..20427
DNA (246bp) protein (82aa)

This feature has no annotations

rifcsplowo2_01_scaffold_1369_32
unknown

Not on your lists

comp(20433..20642)
DNA (210bp) protein (70aa)

This feature has no annotations

rifcsplowo2_01_scaffold_1369_33
unknown

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comp(20684..21229)
DNA (546bp) protein (182aa)

This feature has no annotations

rifcsplowo2_01_scaffold_1369_34
Thermococcus gammatolerans, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

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comp(21260..21580)
DNA (321bp) protein (107aa)
metG; methionyl-tRNA synthetase (EC:6.1.1.10)
Methionine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00098}; EC=6.1.1.10 {ECO:0000256|HAMAP-Rule:MF_00098};; Methionyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00098}; TaxID=593117 species="Archaea; E
Methionine--tRNA ligase n=1 Tax=Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3) RepID=C5A701_THEGJ
Suspect SCG annotation. See neighboring gene [rifcsplowo2_01_scaffold_1369_35].
rifcsplowo2_01_scaffold_1369_35
AR18, Woesearchaeaota, DPANN, Archaea

Not on your lists


comp(21577..23037)
DNA (1461bp) protein (487aa)
metG; methionyl-tRNA synthetase (EC:6.1.1.10); K01874 methionyl-tRNA synthetase [EC:6.1.1.10] id=5048836 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
metG; methionyl-tRNA synthetase (EC:6.1.1.10); K01874 methionyl-tRNA synthetase [EC:6.1.1.10] Tax=AR18
metG; methionyl-tRNA synthetase (EC:6.1.1.10)
rifcsplowo2_01_scaffold_1369_36
RBG_16_Micrarchaeota_36_9_curated, Micrarchaeota, Archaea

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23075..23755
DNA (681bp) protein (227aa)
endonuclease III (EC:4.2.99.18); K10773 endonuclease III [EC:4.2.99.18] Tax=RBG_16_Micrarchaeota_36_9_curated
endonuclease III (EC:4.2.99.18); K10773 endonuclease III [EC:4.2.99.18] id=5048833 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
endonuclease III (EC:4.2.99.18)
rifcsplowo2_01_scaffold_1369_37
AR18, Woesearchaeaota, DPANN, Archaea

Not on your lists

23791..24198
DNA (408bp) protein (136aa)
id=5048831 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Tax=AR18
rifcsplowo2_01_scaffold_1369_38
CG_Pacearch_02, Pacearchaeota, Archaea

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24200..24598
DNA (399bp) protein (133aa)
Tax=CG_Pacearch_02
rifcsplowo2_01_scaffold_1369_39
unknown

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24561..24737
DNA (177bp) protein (59aa)

This feature has no annotations

rifcsplowo2_01_scaffold_1369_40
AR18, Woesearchaeaota, DPANN, Archaea

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24734..25426
DNA (693bp) protein (231aa)
id=5048829 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Tax=AR18
rifcsplowo2_01_scaffold_1369_41
unknown

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25462..25650
DNA (189bp) protein (63aa)

This feature has no annotations

rifcsplowo2_01_scaffold_1369_42
unknown

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26063..27166
DNA (1104bp) protein (368aa)

This feature has no annotations

rifcsplowo2_01_scaffold_1369_43
unknown

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27163..27465
DNA (303bp) protein (101aa)

This feature has no annotations

rifcsplowo2_01_scaffold_1369_44

Not on your lists


27614..28594
DNA (981bp) protein (327aa)
50S ribosomal protein L3 {ECO:0000256|SAAS:SAAS00023038}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
50S ribosomal protein L3; K02906 large subunit ribosomal protein L3 id=5046839 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
50S ribosomal protein L3
rifcsplowo2_01_scaffold_1369_45

Not on your lists


28591..29349
DNA (759bp) protein (253aa)
50S ribosomal protein L4P {ECO:0000313|EMBL:AJS12261.1}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
rpl4lp; 50S ribosomal protein L4P; K02930 large subunit ribosomal protein L4e id=5046840 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
50S ribosomal protein L4
rifcsplowo2_01_scaffold_1369_46
unknown

Not on your lists


29346..29609
DNA (264bp) protein (88aa)
50S ribosomal protein L23P n=3 Tax=Thermococcus RepID=RL23_PYRKO id=5103254 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
50S ribosomal protein L23P n=3 Tax=Thermococcus RepID=RL23_PYRKO Tax=AR20
50S ribosomal protein L23P
rifcsplowo2_01_scaffold_1369_47

Not on your lists


29611..30327
DNA (717bp) protein (239aa)
50S ribosomal protein L2P {ECO:0000313|EMBL:AJS12262.1}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
LSU ribosomal protein l2p; K02886 large subunit ribosomal protein L2 id=5046842 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
rpl2p; 50S ribosomal protein L2P
rifcsplowo2_01_scaffold_1369_48

Not on your lists


30328..30726
DNA (399bp) protein (133aa)
30S ribosomal protein S19P {ECO:0000256|HAMAP-Rule:MF_00531}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
rps19p; 30S ribosomal protein S19; K02965 small subunit ribosomal protein S19 id=5046843 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
30S ribosomal protein S19
rifcsplowo2_01_scaffold_1369_49

Not on your lists


30729..31160
DNA (432bp) protein (144aa)
50S ribosomal protein L22 {ECO:0000256|RuleBase:RU004007}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
rpl22p; 50S ribosomal protein L22P; K02890 large subunit ribosomal protein L22 id=5046844 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
50S ribosomal protein L22P
rifcsplowo2_01_scaffold_1369_50

Not on your lists


31157..31942
DNA (786bp) protein (262aa)
30S ribosomal protein S3 {ECO:0000313|EMBL:AJS12264.1}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
rps3p; 30S ribosomal protein S3; K02982 small subunit ribosomal protein S3 id=5046845 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
30S ribosomal protein S3
rifcsplowo2_01_scaffold_1369_51

Not on your lists


31923..32144
DNA (222bp) protein (74aa)
50S ribosomal protein L29; K02904 large subunit ribosomal protein L29 id=5046846 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
50S ribosomal protein L29P {ECO:0000256|HAMAP-Rule:MF_00374}; TaxID=1579376 species="Archaea.;" source="archaeon GW2011_AR18.;"
50S ribosomal protein L29
rifcsplowo2_01_scaffold_1369_52

Not on your lists

32137..32460
DNA (324bp) protein (108aa)
translation initiation factor SUI1; K03113 translation initiation factor 1 id=5046847 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Protein translation factor SUI1 homolog {ECO:0000256|HAMAP-Rule:MF_00604, ECO:0000256|PIRNR:PIRNR037511}; TaxID=1579375 species="Archaea.;" source="archaeon GW2011_AR17.;"
Protein translation factor SUI1-like protein
rifcsplowo2_01_scaffold_1369_53

Not on your lists

32457..32693
DNA (237bp) protein (79aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00035D6FA3
Marine sediment metagenome DNA, contig: S01H1_S33813 {ECO:0000313|EMBL:GAG38101.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
ribonuclease P, Rpp29
rifcsplowo2_01_scaffold_1369_54

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32690..33019
DNA (330bp) protein (110aa)
Marine sediment metagenome DNA, contig: S01H1_S33813 {ECO:0000313|EMBL:GAG38096.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
30S ribosomal protein S17; K02961 small subunit ribosomal protein S17 id=5046848 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
30S ribosomal protein S17
rifcsplowo2_01_scaffold_1369_55

Not on your lists


33016..33417
DNA (402bp) protein (134aa)
50S ribosomal protein L14; K02874 large subunit ribosomal protein L14 id=5046849 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
50S ribosomal protein L14 {ECO:0000256|HAMAP-Rule:MF_01367}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
50S ribosomal protein L14P
rifcsplowo2_01_scaffold_1369_56
unknown

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33419..33859
DNA (441bp) protein (147aa)

This feature has no annotations

rifcsplowo2_01_scaffold_1369_57

Not on your lists


33846..34220
DNA (375bp) protein (125aa)
50S ribosomal protein L24P {ECO:0000256|HAMAP-Rule:MF_01326}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
50S ribosomal protein L24; K02895 large subunit ribosomal protein L24 id=5046850 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
50S ribosomal protein L24P
rifcsplowo2_01_scaffold_1369_58
AR18, Woesearchaeaota, DPANN, Archaea

Not on your lists

34222..34938
DNA (717bp) protein (239aa)
30S ribosomal protein S4e; K02987 small subunit ribosomal protein S4e id=5046851 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
30S ribosomal protein S4e; K02987 small subunit ribosomal protein S4e Tax=AR18
30S ribosomal protein S4e
rifcsplowo2_01_scaffold_1369_59

Not on your lists


34935..35447
DNA (513bp) protein (171aa)
50S ribosomal protein L5 {ECO:0000256|HAMAP-Rule:MF_01333}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
50S ribosomal protein L5; K02931 large subunit ribosomal protein L5 id=5046852 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
50S ribosomal protein L5
rifcsplowo2_01_scaffold_1369_60
AR18, Woesearchaeaota, DPANN, Archaea

Not on your lists

35437..35679
DNA (243bp) protein (81aa)
hypothetical protein; K02954 small subunit ribosomal protein S14 id=5046853 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
hypothetical protein; K02954 small subunit ribosomal protein S14 Tax=AR18
SSU ribosomal protein S14P
Displaying items 31-60 of 81 in total

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