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rifcsplowo2_01_scaffold_19354

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_01_scaffold_19354_1
AR18, Woesearchaeaota, DPANN, Archaea

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1..468
DNA (468bp) protein (156aa)
id=5046834 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Tax=AR18
rifcsplowo2_01_scaffold_19354_2

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503..1816
DNA (1314bp) protein (438aa)
ftsY; signal recognition particle receptor FtsY; K03110 fused signal recognition particle receptor id=5050700 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Fused signal recognition particle receptor {ECO:0000313|EMBL:KHO53369.1}; TaxID=1579376 species="Archaea.;" source="archaeon GW2011_AR18.;"
Signal recognition particle GTPase
rifcsplowo2_01_scaffold_19354_3
unknown

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comp(1805..2911)
DNA (1107bp) protein (369aa)

This feature has no annotations

rifcsplowo2_01_scaffold_19354_4
unknown

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3046..3186
DNA (141bp) protein (47aa)

This feature has no annotations

rifcsplowo2_01_scaffold_19354_5

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comp(3189..3710)
DNA (522bp) protein (174aa)
Putative uncharacterized protein n=1 Tax=Ichthyophthirius multifiliis (strain G5) RepID=G0QRM7_ICHMG id=5103535 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJF62816.1}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
rifcsplowo2_01_scaffold_19354_6
unknown

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comp(3747..3929)
DNA (183bp) protein (61aa)

This feature has no annotations

rifcsplowo2_01_scaffold_19354_7

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3988..4368
DNA (381bp) protein (127aa)
Suspect SCG annotation. See neighboring gene [rifcsplowo2_01_scaffold_19354_8].
signal recognition particle protein Srp54; K03106 signal recognition particle subunit SRP54 id=5050706 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Signal recognition particle 54 kDa protein {ECO:0000256|HAMAP-Rule:MF_00306}; Short=SRP54 {ECO:0000256|HAMAP-Rule:MF_00306};; TaxID=1579376 species="Archaea.;" source="archaeon GW2011_AR18.;"
SRP54-type protein, GTPase protein
rifcsplowo2_01_scaffold_19354_8
AR18, Woesearchaeaota, DPANN, Archaea

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4395..5327
DNA (933bp) protein (311aa)
signal recognition particle protein Srp54; K03106 signal recognition particle subunit SRP54 id=5050706 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
signal recognition particle protein Srp54; K03106 signal recognition particle subunit SRP54 Tax=AR18
SRP54-type protein, GTPase protein
rifcsplowo2_01_scaffold_19354_9
unknown

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comp(5339..5593)
DNA (255bp) protein (85aa)

This feature has no annotations

rifcsplowo2_01_scaffold_19354_10
RBG_13_Pacearchaeota_33_26_curated, Pacearchaeota, DPANN, Archaea

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5645..6253
DNA (609bp) protein (203aa)
Serine/threonine protein kinase, RIO1 family (EC:2.7.1.-); K07174 Mn2+-dependent serine/threonine protein kinase [EC:2.7.1.-] Tax=RBG_13_Pacearchaeota_33_26_curated
Serine/threonine protein kinase, RIO1 family (EC:2.7.1.-)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037BC5F7
rifcsplowo2_01_scaffold_19354_11
unknown

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6265..6636
DNA (372bp) protein (124aa)

This feature has no annotations

rifcsplowo2_01_scaffold_19354_12
unknown

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6835..7491
DNA (657bp) protein (219aa)

This feature has no annotations

rifcsplowo2_01_scaffold_19354_13
unknown

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7535..7918
DNA (384bp) protein (128aa)

This feature has no annotations

rifcsplowo2_01_scaffold_19354_14
Methanocaldococcus infernus, Methanocaldococcus, Methanococcales, Methanococci, Euryarchaeota, Archaea

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8084..8536
DNA (453bp) protein (151aa)
30S ribosomal protein S15 n=1 Tax=Methanocaldococcus infernus (strain DSM 11812 / JCM 15783 / ME) RepID=D5VTM2_METIM
30S ribosomal protein S15
30S ribosomal protein S15 {ECO:0000256|HAMAP-Rule:MF_01343}; TaxID=573063 species="Archaea; Euryarchaeota; Methanococci; Methanococcales; Methanocaldococcaceae; Methanocaldococcus.;" source="Methanoca
rifcsplowo2_01_scaffold_19354_15

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8538..9113
DNA (576bp) protein (192aa)
SSU ribosomal protein S3AE n=1 Tax=nanoarchaeote Nst1 RepID=R1E4Q5_9ARCH id=5103091 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
SSU ribosomal protein S3AE
SSU ribosomal protein S3AE {ECO:0000313|EMBL:AJF62372.1}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
rifcsplowo2_01_scaffold_19354_16
AR6, Pacearchaeaota, DPANN, Archaea

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9155..9790
DNA (636bp) protein (212aa)
Tax=AR6
rifcsplowo2_01_scaffold_19354_17
unknown

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9793..10506
DNA (714bp) protein (238aa)

This feature has no annotations

rifcsplowo2_01_scaffold_19354_18
CG_Pacearch_06, Pacearchaeota, Archaea

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10608..11573
DNA (966bp) protein (322aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037F6833
hypothetical protein
hypothetical protein Tax=CG_Pacearch_06
rifcsplowo2_01_scaffold_19354_19
Prochlorococcus marinus, Prochlorococcus, Prochlorales, Cyanobacteria, Bacteria

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11692..13296
DNA (1605bp) protein (535aa)
hypothetical protein n=1 Tax=Zymophilus raffinosivorans RepID=UPI0003703CA1
DNA mismatch repair protein MutS {ECO:0000256|HAMAP-Rule:MF_00096, ECO:0000256|SAAS:SAAS00184333}; TaxID=167544 species="Bacteria; Cyanobacteria; Prochlorales; Prochlorococcaceae; Prochlorococcus.;" s
DNA mismatch repair protein MutS domain-containing protein
rifcsplowo2_01_scaffold_19354_20
AR18, Woesearchaeaota, DPANN, Archaea

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13354..13743
DNA (390bp) protein (130aa)
polB; DNA polymerase II (EC:2.7.7.7); K02336 DNA polymerase II [EC:2.7.7.7] id=5048268 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
polB; DNA polymerase II (EC:2.7.7.7); K02336 DNA polymerase II [EC:2.7.7.7] Tax=AR18
polB; DNA polymerase II (EC:2.7.7.7)
Displaying 20 items

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