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gwf2_scaffold_180_112

Organism: GWF2_OD1_38_1205

near complete RP 46 / 55 MC: 2 BSCG 50 / 51 MC: 1 ASCG 11 / 38
Location: comp(114954..115661)

Top 3 Functional Annotations

Value Algorithm Source
Thrombospondin type 3 repeat superfamily protein (Fragment) Tax=GWD2_OD1_38_42 UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 235.0
  • Bit_score: 499
  • Evalue 2.90e-138
peptidoglycan-associated outer membrane protein KEGG
DB: KEGG
  • Identity: 45.8
  • Coverage: 120.0
  • Bit_score: 91
  • Evalue 4.70e-16
Thrombospondin type 3 repeat superfamily protein (Fragment) similarity UNIREF
DB: UNIREF90
  • Identity: 0.0
  • Coverage: 0.0
  • Bit_score: 92
  • Evalue 2.00e+00

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Taxonomy

GWD2_OD1_38_42 → Falkowbacteria → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 708
TTGTTTCTTATCCCTAGTTTTGTTTTTGCTAATTTATTAGTCGATACGGATTTGGATGGGGTGCCGGATGTTGATGAGATTAATGTTTATCGCACTGATCCAGGCAATGCCGATACGGATGGTGATGGCTATTCGGATTGGCGGGAATTGAATGCTGGGTTTTCTCCGCATAATTCTCAAAAAATTAAATTAAAAGATAATGATCAAGACGGTGACGGTCTAATAGATAAAGATGAATTAAGATTTAAAACAGATATTTTAAATAAAGATACAGATGGCGATGGCCATTCCGATGGCGATGAAATTAAAGCCGGGTATGACCCGCTCGATAAAGAAAAAATATTCTTGCCAAAACGCATTGAAGTAAATATTGCCAAGCAAGAATTAAGCTATTTTTTGGGAGACGTAAGAATGGGCACTTACCCCGTTTCCAGCGGAGTCCGAAACTCCACGCCCAAAGGCAATTTTACAATAACAAACAAAAGCCCCAAAGCCTGGTCGCCATACGGCCTCTGGATGCCGTATTGGATGGGACTGAATAGCGGCCGAGTAGGAATCCACGAACTACCGATCTGGCCAAATGGCTACCGCGAAGGCGAGAATCACCTCGGCACGTCAGTATCCCACGGCTGTATCAGACTCGGCATTGGCGCCGCGAAGTTTATCTACGATTGGACGCCGGTGGGGACTGGGGTGGTTGTGTATTAA
PROTEIN sequence
Length: 236
LFLIPSFVFANLLVDTDLDGVPDVDEINVYRTDPGNADTDGDGYSDWRELNAGFSPHNSQKIKLKDNDQDGDGLIDKDELRFKTDILNKDTDGDGHSDGDEIKAGYDPLDKEKIFLPKRIEVNIAKQELSYFLGDVRMGTYPVSSGVRNSTPKGNFTITNKSPKAWSPYGLWMPYWMGLNSGRVGIHELPIWPNGYREGENHLGTSVSHGCIRLGIGAAKFIYDWTPVGTGVVVY*