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gwf2_scaffold_492_34

Organism: GWF2_OD1_38_1205

near complete RP 46 / 55 MC: 2 BSCG 50 / 51 MC: 1 ASCG 11 / 38
Location: comp(29419..30009)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:KKQ73123.1}; TaxID=1618637 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Falkowbacteria) bacterium GW2011_GWD2_38_42.;" UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 196.0
  • Bit_score: 385
  • Evalue 3.90e-104
ECF subfamily RNA polymerase sigma factor KEGG
DB: KEGG
  • Identity: 44.2
  • Coverage: 190.0
  • Bit_score: 155
  • Evalue 1.70e-35
RNA polymerase, sigma-24 subunit, ECF subfamily similarity UNIREF
DB: UNIREF90
  • Identity: 0.0
  • Coverage: 0.0
  • Bit_score: 167
  • Evalue 4.00e+00

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Taxonomy

GWD2_OD1_38_42 → Falkowbacteria → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 591
ATGCCGGAAAATTCCAACATTGAGGAAAAAAGCGATGAAGAATTAGTCGGCTTGGCGATTAAAGATCAGGCTGTTTTTTTGCACATTATGAATCGTTATCAAGCAAAATTGCTCTATTATATCAAAAGAATTTCCGGGTTAAGCAATGACGAAGCGGAAGATGTGTTGCAGGATGTCTTTATAAAAATCTATCAAAATTTGAATGATTTTGACATTGATTTGAAGTTTTCTTCGTGGGCATATCGGATTACGCATAATCAGGTAATCAGTAATTTTCGAAAAATCCAAGCGCGTCCGCAAAACGCCGGCATTGATTTGAATGATGATTCATTGCGCGGCTTGGCGGCGGATTTGGATATTGAGGGGAAAATAGACAATAGTTTGTTAAGGGAAAAAATCAATAAGATTTTAAATAATTTGGAATATAAATATAAAGAAGTCTTGATTTTGAAATTTTTTGAAGAAAAAGATTATAAGGAAATTTCAGATATTTTAAAAAAACCCATGGGCACGGTTGCCTCACTCATGAATCGCGCGAAAATCAAGTTTCGGGAAGAAATGGATAGGCGGGATAGTTTGGAAATAAAATAA
PROTEIN sequence
Length: 197
MPENSNIEEKSDEELVGLAIKDQAVFLHIMNRYQAKLLYYIKRISGLSNDEAEDVLQDVFIKIYQNLNDFDIDLKFSSWAYRITHNQVISNFRKIQARPQNAGIDLNDDSLRGLAADLDIEGKIDNSLLREKINKILNNLEYKYKEVLILKFFEEKDYKEISDILKKPMGTVASLMNRAKIKFREEMDRRDSLEIK*