ggKbase home page

gwf2_scaffold_2815_12

Organism: GWF2_OD1_40_263

near complete RP 47 / 55 BSCG 48 / 51 ASCG 14 / 38 MC: 1
Location: comp(15775..16359)

Top 3 Functional Annotations

Value Algorithm Source
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RIFOXYB2_FULL_OD1_Uhrbacteria_41_18_curated UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 194.0
  • Bit_score: 383
  • Evalue 1.90e-103
ECF subfamily RNA polymerase sigma-24 subunit KEGG
DB: KEGG
  • Identity: 32.9
  • Coverage: 164.0
  • Bit_score: 92
  • Evalue 1.80e-16
RNA polymerase, sigma-24 subunit, ECF subfamily similarity UNIREF
DB: UNIREF90
  • Identity: 0.0
  • Coverage: 0.0
  • Bit_score: 91
  • Evalue 2.00e+00

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RIFOXYB2_FULL_OD1_Uhrbacteria_41_18_curated → Uhrbacteria → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 585
GTGCAAGGCTCAAAGGAACAATTTCTCCTTTACCGATTGCGGGTCTATAAAGATCCACGTGCCTTTGCGCAGATATTTCACAAGCACAAACCTCCTGTTTATCGGTACCTTTCTACAAAGTTGCCGAGCAGGCAGGATGCTGAAGACGCTCTCTCAACCACTTTCCTTCGTCTCTGGAATTATACGACAACCGCGCAAGTTGATCATGTTGGCAGTTTGGCCATCACGATTGCCCGCGGAGTTGTCGCAGACTTCTATCGATCAAGAAAGAAAGAAACTTCTCTTGATGAAAGTAATAAAGAAGTTGCAGATACCACAAACACAGAAGAAGAGCTTATGGTGAGATCAGACATCTCTTTGGTAAAGAAGATTCTTCCAAAGTTGAAGTCAGAATATCAAGAGATTGTGATCCTTCGCTATTTGGAAGGTCTTTCCACAAAAGAAGTCGCACACTATTTAGAAAAATCTGAAAGTGCGATTCGTGTGGGACTTCACCGTGCTTTGAAAGAACTCCGTGCCTTGTTTTCTAAAGAACAACATGAACGAGAAAGAGATCACACAATTCCTCCAGAACCTCGAGAATAA
PROTEIN sequence
Length: 195
VQGSKEQFLLYRLRVYKDPRAFAQIFHKHKPPVYRYLSTKLPSRQDAEDALSTTFLRLWNYTTTAQVDHVGSLAITIARGVVADFYRSRKKETSLDESNKEVADTTNTEEELMVRSDISLVKKILPKLKSEYQEIVILRYLEGLSTKEVAHYLEKSESAIRVGLHRALKELRALFSKEQHERERDHTIPPEPRE*