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gwf2_scaffold_26559_4

Organism: GWF2_OD1_42_19

near complete RP 37 / 55 MC: 1 BSCG 42 / 51 MC: 3 ASCG 10 / 38 MC: 3
Location: comp(3158..3961)

Top 3 Functional Annotations

Value Algorithm Source
ribosomal large subunit pseudouridine synthase D (EC:5.4.99.-) KEGG
DB: KEGG
  • Identity: 47.0
  • Coverage: 183.0
  • Bit_score: 157
  • Evalue 6.10e-36
Pseudouridine synthase, RluA family Tax=GWF2_OD1_42_19 UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 267.0
  • Bit_score: 540
  • Evalue 9.80e-151
Pseudouridine synthase, RluA family similarity UNIREF
DB: UNIREF90
  • Identity: 0.0
  • Coverage: 0.0
  • Bit_score: 223
  • Evalue 5.00e+00

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Taxonomy

GWF2_OD1_42_19 → Giovannonibacteria → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 804
ATGATACGCATCCCCATTCTCTATAAAGACGATGATGTGCTGGTCATAAATAAACCAGCCGGGCTTGTCGTACATTCTGACGGAAGAACAAAAGAACCGACGCTTGTTGACTGGATTCTCAAGAATTATCCGAGAATTAAAGGGGTCGGCGACCCAAATGAATTTGGAAGTAAGAATTATGAATTAAGGGGGAAAAATGCAAAAGAAGATTCTTCGCATAATTCATACCTCACACTTCATAATTCATCGGCCGACTTGCGGCCGGGCATCGTCCATCGGCTCGATAGGGAAACAAGCGGCGCGCTCATCATCGCGAAAAATCAAACTGCATTCATGCGGCTGAAAAAGCAGTTTCAGCGCAAGGAAGTGCGCAAGGTGTACCACGCGTTTGTCTACGGTTCAGTGAAAGATGACGAAGGAGTGATTGATCGCCCCATCGCGCGTAGCCGCGCGAACCACATTCGGTGGTCGGCAACGCGAGGCAGAAAAGGAGTGGCGAGGGATGCCGTTACTGACTATCAGGTATTGCATCGCGGAAAGGACTTTACCTTTCTTGAACTCCGTCTTCGCACCGGCCGGACGCACCAAATTAGAGTGCATCTCAAGGCCATCAACTATCCGGTCATATGTGACAAACTATACGCTCCGCGCCGCGCGTGCGCACTCGGGTTTACCCGCCTTGCGCTCCATTCGCGCTCTGTCTCATTCTTGCTTCCGCGTAGCGGGAAGCGGATAACAGTTGACGCCCCCTATCCGGCAGATTTCGAGCATGCCCGAAATCTGCTGGGAATGTCCAATATCTAA
PROTEIN sequence
Length: 268
MIRIPILYKDDDVLVINKPAGLVVHSDGRTKEPTLVDWILKNYPRIKGVGDPNEFGSKNYELRGKNAKEDSSHNSYLTLHNSSADLRPGIVHRLDRETSGALIIAKNQTAFMRLKKQFQRKEVRKVYHAFVYGSVKDDEGVIDRPIARSRANHIRWSATRGRKGVARDAVTDYQVLHRGKDFTFLELRLRTGRTHQIRVHLKAINYPVICDKLYAPRRACALGFTRLALHSRSVSFLLPRSGKRITVDAPYPADFEHARNLLGMSNI*