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RBG_13_KAZAN_50_9_RBG_13_scaffold_30_173

Organism: candidate division Kazan bacterium RBG_13_50_9

near complete RP 49 / 55 MC: 2 BSCG 48 / 51 ASCG 10 / 38
Location: 193649..195133

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma-70 subunit RpoD; K03086 RNA polymerase primary sigma factor Tax=RBG_13_KAZAN_50_9_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 494.0
  • Bit_score: 953
  • Evalue 1.20e-274
RNA polymerase sigma factor id=2896396 bin=GWA1_Kazan_50_15 species=GWC1_KAZAN_52_13 genus=GWC1_KAZAN_52_13 taxon_order=GWC1_KAZAN_52_13 taxon_class=GWC1_KAZAN_52_13 phylum=KAZAN tax=GWA1_Kazan_50_15 organism_group=Kazan organism_desc=Probably Kazan: candidate for curation similarity UNIREF
DB: UNIREF100
  • Identity: 65.8
  • Coverage: 515.0
  • Bit_score: 612
  • Evalue 3.50e-172
RNA polymerase sigma-70 subunit RpoD similarity KEGG
DB: KEGG
  • Identity: 57.3
  • Coverage: 382.0
  • Bit_score: 413
  • Evalue 8.80e-113

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Taxonomy

RBG_13_KAZAN_50_9_curated → Kazan → Bacteria

Sequences

DNA sequence
Length: 1485
ATGGTAATTAAAAGGCGCACTAAAAGGGTAACTGCCCCAAAGCGGCGGGCTGTGCGTAGGCATAAGGCAGCTAAGAAAGCGGCGGCCAAAAAACGAGCCAAAAGGAAGATAGCTCCAAAGAGGCCTATCAGAAAAAAGTTGGAAGCCAAAAAAGCACCGAAGCGCCGTGCGGCCCGGGCGGCTAAGAAAAGGATTCACAAGAAAGTAGCTAAAAGAATGGTCCGGCGAGCTATTAAGCGTGGGCCAGTTAAGAGAGCAGGTAGAAAGCCGGCTAAAAAAGTTAAGAAGGTAGCATTAGAGATAAAAAAGGTCGAGGAGGAACCCCAACTGGAGGATCTGGAAGTAAAAGATATCGAAGATATCAAAAAGAAGCACAAGCAGTATAGATTTCCTCCGGAGGTTGAATATTTAGTGCTCAAAGGCCAGGATCAGGGATTTGTTACCCAGCAAGAGATCGTGCAGGCCTTGCCGGAGGCAGAGAACAACGTGGACCTGCTAGATAAGTTGTATGAGGCTTTCTTTGATCTAGGTATTGAAGTGGTGGATATGCGCGATGATCTGATCTGGCAGACTGGGGCTTTCGGGGAAACAAAGAAAAAAACTAGGAAGAAGAGATCGGTTCGAGCGGGCTTGAGCGAGACGGAGGCCCAAGAGACCATTGGCGAGGATTCGGTGAGGATGTATTTGAAGGAGATCGGGCAGATCCCGCTTTTGAAGAAACCGGAAGAGGTAGCCTTAGCTAAGCGGGTGGCCGCTGGTGATAAGGTGGCGTCAAAGCAGCTGGCTGAAGCTAATCTGCGCCTGGTGGTCAGCATCGCCAAGAAGTATATCGGCCGAGGGCTATCATTGCTGGATCTGATCCAGGAGGGAAACATTGGCCTAATGAAGGCAGTAGAAAAGTTTGACTATACTAGGGGGTTTAAGTTCTCGACCTATGCTACTTGGTGGATTAGGCAGGCGATCACTAGGGCTATTGCTGACCAGGCCAGGACTATTCGTATCCCCGTACATATGGTGGAGACGATGAATCGACTAGCACGCACCCAACGACAGTTGGTGCAGGAATTGGGGCGTGAGCCTACACCGCAGGAGATAGCCAATGAGATGGAGTTGGATATTGAGAAAGTAAACCATATCCTTAAGATCTCTCAAGAGACGGTTTCTTTGGAAAAACCAGTAGGGGATGAAGACGATAGCTTGCTGGGTGATTTTATTAAGGATGAGGATAGCTTAACGCCAGAGGAGCAGTCGGCCTATGAAATGCTCAAGAGTGATGTTGGCTTAGTGCTGCATCTGCTGACACCGCGCGAGCAGAAGATTCTAAGGATGAGGTTCGGCTTGAGCGGTGAATGGGCCCATACATTAGAAGAGGTAGGTAAGGAGTTTGGGGTTACCCGGGAGCGCATCCGTCAGATAGAGGCCAAGGCGCTGATGAAGCTCAGGAAATCCAAGGATAGCAAACGGTTGAAGGATTATCTGAAGTAG
PROTEIN sequence
Length: 495
MVIKRRTKRVTAPKRRAVRRHKAAKKAAAKKRAKRKIAPKRPIRKKLEAKKAPKRRAARAAKKRIHKKVAKRMVRRAIKRGPVKRAGRKPAKKVKKVALEIKKVEEEPQLEDLEVKDIEDIKKKHKQYRFPPEVEYLVLKGQDQGFVTQQEIVQALPEAENNVDLLDKLYEAFFDLGIEVVDMRDDLIWQTGAFGETKKKTRKKRSVRAGLSETEAQETIGEDSVRMYLKEIGQIPLLKKPEEVALAKRVAAGDKVASKQLAEANLRLVVSIAKKYIGRGLSLLDLIQEGNIGLMKAVEKFDYTRGFKFSTYATWWIRQAITRAIADQARTIRIPVHMVETMNRLARTQRQLVQELGREPTPQEIANEMELDIEKVNHILKISQETVSLEKPVGDEDDSLLGDFIKDEDSLTPEEQSAYEMLKSDVGLVLHLLTPREQKILRMRFGLSGEWAHTLEEVGKEFGVTRERIRQIEAKALMKLRKSKDSKRLKDYLK*