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RIFCSPHIGHO2_01_FULL_OD1_37_110_rifcsphigho2_01_scaffold_7392

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPHIGHO2_01_FULL_OD1_37_110_rifcsphigho2_01_scaffold_7392_1
RLO_OD1_Nomurabacteria_37_8, Nomurabacteria, Parcubacteria, Bacteria

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3..1844
DNA (1842bp) protein (614aa)
DNA topoisomerase I (EC:5.99.1.2)
DNA topoisomerase n=1 Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7PWA5_9BACT
Topoisomerase IA Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_37_8_curated
RIFCSPHIGHO2_01_FULL_OD1_37_110_rifcsphigho2_01_scaffold_7392_2
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

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comp(2106..2756)
DNA (651bp) protein (217aa)
Two component transcriptional regulator, LuxR family n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q024Y7_SOLUE
LuxR family transcriptional regulator
Two component transcriptional regulator, LuxR family {ECO:0000313|EMBL:ABJ83439.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.
RIFCSPHIGHO2_01_FULL_OD1_37_110_rifcsphigho2_01_scaffold_7392_3
R_OD1_Nomurabacteria_42_17, Nomurabacteria, Parcubacteria, Bacteria

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2921..4387
DNA (1467bp) protein (489aa)
relA; GTP pyrophosphokinase (EC:2.7.6.5) Tax=RIFCSPLOWO2_01_FULL_OD1_Nomurabacteria_42_17_curated
id=5227212 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
GTP pyrophosphokinase
RIFCSPHIGHO2_01_FULL_OD1_37_110_rifcsphigho2_01_scaffold_7392_4
R_OD1_Nomurabacteria_42_17, Nomurabacteria, Parcubacteria, Bacteria

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comp(4400..5383)
DNA (984bp) protein (328aa)
parB-like partition protein; K03497 chromosome partitioning protein, ParB family Tax=RIFCSPLOWO2_01_FULL_OD1_Nomurabacteria_42_17_curated
id=5227213 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
parB-like partition protein
RIFCSPHIGHO2_01_FULL_OD1_37_110_rifcsphigho2_01_scaffold_7392_5
RLO_OD1_Nomurabacteria_37_8, Nomurabacteria, Parcubacteria, Bacteria

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5559..6890
DNA (1332bp) protein (444aa)
UDP-N-acetylglucosamine 1-carboxyvinyltransferase; K00790 UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_37_8_curated
Transcriptional regulator, XRE family n=1 Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7PYD3_9BACT
UDP-N-acetylglucosamine 1-carboxyvinyltransferase
RIFCSPHIGHO2_01_FULL_OD1_37_110_rifcsphigho2_01_scaffold_7392_6
RLO_OD1_Nomurabacteria_37_8, Nomurabacteria, Parcubacteria, Bacteria

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6887..7762
DNA (876bp) protein (292aa)
tRNA dimethylallyltransferase (EC:2.5.1.75); K00791 tRNA dimethylallyltransferase [EC:2.5.1.75] Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_37_8_curated
tRNA dimethylallyltransferase (EC:2.5.1.75)
tRNA delta(2)-isopentenylpyrophosphate transferase id=3152155 bin=GWC1_OD1_38_17 species=ACD81 genus=ACD81 taxon_order=ACD81 taxon_class=ACD81 phylum=OD1 tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
RIFCSPHIGHO2_01_FULL_OD1_37_110_rifcsphigho2_01_scaffold_7392_7
RLO_OD1_Nomurabacteria_37_8, Nomurabacteria, Parcubacteria, Bacteria

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comp(7759..8352)
DNA (594bp) protein (198aa)
Protein dedA n=1 Tax=Nitrolancetus hollandicus Lb RepID=I4EG98_9CHLR
DedA protein Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_37_8_curated
DedA protein
RIFCSPHIGHO2_01_FULL_OD1_37_110_rifcsphigho2_01_scaffold_7392_8
GWF2_OD1_43_24, Nomurabacteria, Parcubacteria, Bacteria

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comp(8495..8653)
DNA (159bp) protein (53aa)
50S ribosomal protein L33 {ECO:0000313|EMBL:KKT11845.1}; TaxID=1618778 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Nomurabacteria) bacterium GW2011_GWF2_43_24.;"
50S ribosomal protein L33; K02913 large subunit ribosomal protein L33 id=5803473 bin=OD1_GWC2_34_28 species=ACD76 genus=ACD76 taxon_order=ACD76 taxon_class=ACD76 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
rpmG; 50S ribosomal protein L33
RIFCSPHIGHO2_01_FULL_OD1_37_110_rifcsphigho2_01_scaffold_7392_9
RLO_OD1_Nomurabacteria_37_8, Nomurabacteria, Parcubacteria, Bacteria

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comp(8734..9906)
DNA (1173bp) protein (391aa)
alr; alanine racemase; K01775 alanine racemase [EC:5.1.1.1] Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_37_8_curated
alr; alanine racemase; K01775 alanine racemase [EC:5.1.1.1] id=88331 bin=ACD5 species=ACD5 genus=ACD5 taxon_order=ACD5 taxon_class=ACD5 phylum=OD1 tax=ACD5 organism_group=OD1-i organism_desc=OD1-i
alanine racemase
RIFCSPHIGHO2_01_FULL_OD1_37_110_rifcsphigho2_01_scaffold_7392_10
RLO_OD1_Nomurabacteria_37_8, Nomurabacteria, Parcubacteria, Bacteria

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comp(9938..12334)
DNA (2397bp) protein (799aa)
ddlA; D-alanine--D-alanine ligase Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_37_8_curated
ddlA; D-alanine--D-alanine ligase id=5097102 bin=PER_GWF2_39_17 species=PER_GWF2_39_17 genus=PER_GWF2_39_17 taxon_order=PER_GWF2_39_17 taxon_class=PER_GWF2_39_17 phylum=PER tax=PER_GWF2_39_17 organism_group=PER (Peregrinibacteria)
ddlA; D-alanine--D-alanine ligase
RIFCSPHIGHO2_01_FULL_OD1_37_110_rifcsphigho2_01_scaffold_7392_11
RLO_OD1_Nomurabacteria_37_8, Nomurabacteria, Parcubacteria, Bacteria

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comp(12433..13194)
DNA (762bp) protein (254aa)
peptidase M24; K01262 Xaa-Pro aminopeptidase [EC:3.4.11.9] Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_37_8_curated
peptidase M24; K01262 Xaa-Pro aminopeptidase [EC:3.4.11.9] id=5095513 bin=PER_GWF2_38_29 species=PER_GWF2_38_31 genus=PER_GWF2_38_31 taxon_order=PER_GWF2_38_31 taxon_class=PER_GWF2_38_31 phylum=PER tax=PER_GWF2_38_29 organism_group=PER (Peregrinibacteria)
peptidase M24
RIFCSPHIGHO2_01_FULL_OD1_37_110_rifcsphigho2_01_scaffold_7392_12
RLO_OD1_Nomurabacteria_37_8, Nomurabacteria, Parcubacteria, Bacteria

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comp(13221..14321)
DNA (1101bp) protein (367aa)
membrane-associated zinc metalloprotease; K11749 regulator of sigma E protease [EC:3.4.24.-] Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_37_8_curated
Uncharacterized protein n=1 Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7PW15_9BACT
membrane-associated zinc metalloprotease
RIFCSPHIGHO2_01_FULL_OD1_37_110_rifcsphigho2_01_scaffold_7392_13
RLO_OD1_Nomurabacteria_37_8, Nomurabacteria, Parcubacteria, Bacteria

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comp(14396..14947)
DNA (552bp) protein (184aa)
ribosome recycling factor Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_37_8_curated
ribosome recycling factor; K02838 ribosome recycling factor id=5227117 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
ribosome recycling factor
RIFCSPHIGHO2_01_FULL_OD1_37_110_rifcsphigho2_01_scaffold_7392_14
RLO_OD1_Nomurabacteria_37_8, Nomurabacteria, Parcubacteria, Bacteria

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comp(14971..15702)
DNA (732bp) protein (244aa)
DNA polymerase III subunit delta'; K02341 DNA polymerase III subunit delta' [EC:2.7.7.7] Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_37_8_curated
DNA polymerase III subunit delta'; K02341 DNA polymerase III subunit delta' [EC:2.7.7.7] id=5803600 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
holB; DNA polymerase III, delta prime subunit (EC:2.7.7.7)
RIFCSPHIGHO2_01_FULL_OD1_37_110_rifcsphigho2_01_scaffold_7392_15
R_OD1_Nomurabacteria_37_25, Nomurabacteria, Parcubacteria, Bacteria

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comp(15705..16718)
DNA (1014bp) protein (338aa)
MreB/Mrl family cell shape determining protein; K03569 rod shape-determining protein MreB and related proteins Tax=RIFCSPLOWO2_01_FULL_OD1_Nomurabacteria_37_25_curated
id=5227119 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
MreB/Mrl family cell shape determining protein
RIFCSPHIGHO2_01_FULL_OD1_37_110_rifcsphigho2_01_scaffold_7392_16
GWC2_OD1_35_8, Nomurabacteria, Parcubacteria, Bacteria

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16755..17078
DNA (324bp) protein (108aa)
Uncharacterized protein {ECO:0000313|EMBL:KKP89588.1}; TaxID=1618752 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Nomurabacteria) bacterium GW2011_GWC2_35_8.;"
Displaying 16 items

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