ggKbase home page

RIFCSPHIGHO2_01_FULL_OD1_37_110_rifcsphigho2_01_scaffold_5667_5

Organism: Candidatus Nomurabacteria bacterium RIFCSPHIGHO2_01_FULL_37_110

partial RP 36 / 55 MC: 1 BSCG 37 / 51 MC: 1 ASCG 7 / 38
Location: comp(4997..6265)

Top 3 Functional Annotations

Value Algorithm Source
type II secretion system protein; K02653 type IV pilus assembly protein PilC Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_37_8_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 422.0
  • Bit_score: 799
  • Evalue 3.20e-228
type IV pilin; K02653 type IV pilus assembly protein PilC id=5227504 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria) similarity UNIREF
DB: UNIREF100
  • Identity: 54.3
  • Coverage: 407.0
  • Bit_score: 438
  • Evalue 7.70e-120
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 33.4
  • Coverage: 404.0
  • Bit_score: 252
  • Evalue 1.70e-64

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RLO_OD1_Nomurabacteria_37_8 → Nomurabacteria → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 1269
GTGGGGCTGGGTGGCTGTTTTAATAGTCGCTTCACTCCTTTAAAACTAGCCATGCTTTTCTCATATACAACAAAGTCAAAAACGGGAGAAATAACAGAAGGTACATTAGAGGCGCAAGACCGGCTAGCACTGGCTCATGACTTGCGGTCTCGCGGTCTCATTCCTATATCAATAACAGAGAAAAATAAGCAATTTTCTGACCAATTACTGACATTTAAAAATATTTTTTCCAAAGTAAGTGTCGGAGAGCAGATTATTTTGACAAAAAATTTAAGTGGCATGTTAAAGGCCGGACTTTCGCTTTATCGAGCTTTGTCTGTTTTGCAAAAACAGACAAAAAATTCTACGCTTAATAGAATTTTAATATCTTTAAGTAGTAATATAAATTCTGGAGAGACATTATCCTTCGGACTTGCGAAATTTCCCAACGTCTTTTCCAAACTTTTTATATCAATGACGAAGGCTGGCGAAGAGTCTGGCAACTTGGCCGGCGCTCTCTCTGACGTGGGGATGAATTTAGATAAATCACATTCCCTGACCAAGAAAATACACGGAGCGCTTATTTATCCGGGGGTGATTTTGTCCGCGATGATCGTGATCGGTGTTTTAATGTTTGCTTTTGTGGTGCCTACGCTCGCGAGCACTTTCAAAGAGCTTGGCGTTGTTTTACCCGCCTCCACTCGTTTTATTATTTTCCTCGGCACTTTTTTCTCCAATAATTTAATATTAACTTTTGTGGTTATCATCGGTGGGTTTTTAGGCCTGTACTCTCTCTTGCGTGCCCAGTTTATAGCAAAATATTTTGATTATGTTATTGTTCGGCTTCCGCTCATTGGCAATTTAACAAAAGAATTAAATACTGCCCGCACTGCCCGCACCATGTCTTCGTTGTTGCTTGCCGGGGTTTCTATCACAAGGGCGATTGAAATAACTGAAGATGTTGTGCAAAACATTTATTATAAAAGAATTTTAAATCAAGCAAAAGAAATTGTTGAAAAAGGAGCTCCATTTTCCGAAGTCTTTGCGATGAATAGTAATCTTTACCCTGTGATGATGTCTGAGATGATCCAAGTTGGAGAAGAAACTGGAAAATTGTCAGACATGTTACTACAGATTGCTCTCTTCTACGAGGAAGAGATTGAGAATAAAACCAGAAATCTTTCCACTATTATTGAGCCAGTATTGATGATAGTAATCGGAGCCGGGGTTGGGTTCTTTGCCATTTCAATGATTTCTCCACTTTATTCGGTTTTAGACAGTATTAAATAA
PROTEIN sequence
Length: 423
VGLGGCFNSRFTPLKLAMLFSYTTKSKTGEITEGTLEAQDRLALAHDLRSRGLIPISITEKNKQFSDQLLTFKNIFSKVSVGEQIILTKNLSGMLKAGLSLYRALSVLQKQTKNSTLNRILISLSSNINSGETLSFGLAKFPNVFSKLFISMTKAGEESGNLAGALSDVGMNLDKSHSLTKKIHGALIYPGVILSAMIVIGVLMFAFVVPTLASTFKELGVVLPASTRFIIFLGTFFSNNLILTFVVIIGGFLGLYSLLRAQFIAKYFDYVIVRLPLIGNLTKELNTARTARTMSSLLLAGVSITRAIEITEDVVQNIYYKRILNQAKEIVEKGAPFSEVFAMNSNLYPVMMSEMIQVGEETGKLSDMLLQIALFYEEEIENKTRNLSTIIEPVLMIVIGAGVGFFAISMISPLYSVLDSIK*