ggKbase home page

RIFCSPHIGHO2_01_FULL_OD1_40_12b_rifcsphigho2_01_scaffold_54406_4

Organism: Candidatus Portnoybacteria bacterium RIFCSPHIGHO2_02_FULL_39_12

near complete RP 44 / 55 MC: 1 BSCG 46 / 51 ASCG 12 / 38 MC: 1
Location: 2227..5160

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI00035E2C1A similarity UNIREF
DB: UNIREF100
  • Identity: 69.3
  • Coverage: 584.0
  • Bit_score: 793
  • Evalue 2.90e-226
Type II secretion system protein E Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_08_40_12b_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 977.0
  • Bit_score: 1849
  • Evalue 0.0
secretion system protein E similarity KEGG
DB: KEGG
  • Identity: 45.2
  • Coverage: 599.0
  • Bit_score: 500
  • Evalue 8.30e-139

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_RIF_OD1_08_40_12b → RIF-OD1-8 → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 2934
ATGCGCGTTGAGCCATCGCAACTAAAAGCTTTTTTATTAGACGCTAATTTAGCGACTGAAAAACAGCTTGAGAAAGCGGAGAAGGAAGCCCAAAAAACGGGTAAAAAACTAGGCGATGTTTTAATTGGGCAAAAACTTATCGCCGAGGAACGGCTCATCAGATTGGAGGCCTATATCTTAGGCATTCCTTTTGTTAATCTGGAAAAAGAAATTATTCCCAAAGAAGTTTTACAAATTATTCCTGAACCAATCGCCCGAAAGCATAATATTATCTCTTTTAGAAAGCGGGGCAAAGAGCTGGAAGTGGCGATGTTGGACCCGGAAGACCTGCAAACCATTGAATTTATTAAGAAAAAATCAGATTTAAAGATTTTGCCCTGTTTAACCACCAAAGAGAGCCTTAAAAATACCCTCAAGCAATATCAAAAGAGTTTAGAAGCGGAGTTTGGCGAACTGATTAAAAAAGAAGCCAAGATTATTTCTTGGCCGGGAAAAGGCCTTCAGAAGACAAAGGAGGAATTGGCGAAAGCGGCCGAGGAAGTGTCAATCATAAGGATAATTGACACTCTTTTAAAACACGCCATTTTACAACTTGCTTCTGATATTCATATTGAGCCCTTGGAAAAAGAAGTCATTGTTCGTTATCGCATTGACGGTATTTTACACGACGCCATGACCCTGCCAAAAAATATTCATTCCGGTTTGGCGGCCAGAATTAAGGTTCTTTCAAATCTTAAACTTGACGAACATCGTCTGCCCCAAGACGGCCGTTTTAAAATTGAAACCAACGAGACCAAGGTTTCTTTTCGGGTGTCAATTCTGCCGGTTTATGACGGAGAAAAGATTGTCATGCGGCTTTTGCCGGAAAACGCCAAAGGCCTGACTTTGGAAATTCTTGGATTAAGAGGCTCGCCTTTGGAAATAATTCATCAAAATATCAAAAAACCAAACGGGATGATTTTGGTGACCGGACCGACCGGCTGCGGCAAAACCACCACTCTTTATACTATTATGGATATTTTAAATACGCCTGAAGTTAACATTTCCACCATTGAAGACCCGATTGAATACCGCATGCCGCGGATTAACCAAACCCAGGTCCAACCCCGCATCGGTTTGACTTTTGCTAATGGTTTGAGGTCTTTAGTCAGGCAGGACCCGGATATCATTATGGTGGGCGAGATTCGGGACAACGAAACCGCTTCTCTGGCGGTTAATGCGGCTTTAACCGGGCATTTGCTTCTTTCCACTTTGCATACCAATAACGCGGCCGGCGCTTTCCCGCGTTTAATTGATATGAAAGTTGAGCCATTTCTGATCGGTTCAACCGCCAATGTCATTATTGCTCAAAGATTGGTCAGGCGGCTTTATCCGGACAGTAAAAAGAATTATAAATTGAGCCAGCCGGAGATAAAAAGCTTAAAAGAGCAGTTTGATTTAGAGCGCGTTCTTAACACTCTCAAGCAGGAAAAAATTATCGCCCCGAATCTTGATTGGCCCGATATTGAGTTTTATCGTCCCGGGGAATCCAAAGAATGTCCAGACGGCTATAAAGGCCGGTTCGGCATTTATGAGGTTTTAGAAGTCAGCCAGAGTATTAAAGATTTAATTACCCGGGAAGCGACGACCGATGCTATTGAAGTTCAAGCCAAAAAAGAAGGGATGTTCACAATGTTAGAAGACGGGTTTGTTAAGGCGGTTCAGGGCATGACGAGTATTGAGGAAGTGTTGAGGGTGACGAAAGnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnAACATGAATTAGCCAATAATCTTCGTCAAGAAGGCCTGTTTTTAATTTCAGCGAAAAAGACAGGTCGGGAGGAAAAAACAGGTCGGCCTGATTTTGGTTTTTTGTCCTTGTTAAACGGGCTTCGCCATGTTTCCTTGGTGGAAAAAATGATGTTTAGCCGGCATTTGGCCGTCATGATTGAAGCCGGCCTTTCTTTGAACCGCGCCTTAGAGACCTTGGCTAAACAAAGTAAAAATTCCAAGTTCAGAAAAATTATTAGCCAAGTAGAAATAGATGTCAGGGCCGGCCAATCTTTTAGCGGCGCTTTAGCCAAACACCCGGCCGCCTTTAACGAACTTTATGTCAATATGGTTAAAGCCGGAGAAACAGCCGGCAATCTGGAAGAGATCTTGAAGGTTTTATCAGAGCAGATGGACAAAGACCACCAATTGATTTCCCGGGTAAGGGGAGCGATGATGTATCCGGCCGTTGTTTTAACCGCAATGGTTGGCATTGGCGTTTTGATGATGGTGATGGTGGTTCCTAAGCTGAATGAAACTTTTATTGAATTAAAGATAGATTTGCCGTTCACCACCAGAACTATTATTTCCGTTAGTAATTTTTTAAAAAATAACTTAATTTTAGGGCTGGTTGGTTTAGCGGCCGCCGTTATTTTATTGAGATTAAGCGTTAAAACAAAATCCGGCCAGAAAATATTTCATAAATTTTTTTTGCTGCTTCCTCCCTTTGGCGGCATTGTCCAAAAAGTTAATTCAGCCCGTTTGGCCAGAACTTTATCTTCCTTGGTGAACAGCGGAGTGGCTTTTGTCAAGGCGCTTCAGATTACAGCCGACACCTTAGGCAATATTTATTTCAAAGAAGCGCTTTTTGATTCTGCTCAACAGGTCCAGAAAGGAAAGCCGTTAAGCCAGTCCCTGGGAAAATATAAAGACCTCTATCCATTAATGATTATTCAGATGATTCAGGTCGGCGAAGAAACAGGCAGCTTAAGCGAGACCCTAAAAACTTTGGCTGATTTTTACGATGAAGAAGTGGCCAATCTGACTAAGGGCCTGTCGTCTATCATTGAGCCGGTGCTGATGGTTATTATCGGAGCGATTGTCGGTTTTTTCGCCATCTCTATGATTCAGCCTATGTATTCAGTAATGTCGGGACTTTAA
PROTEIN sequence
Length: 978
MRVEPSQLKAFLLDANLATEKQLEKAEKEAQKTGKKLGDVLIGQKLIAEERLIRLEAYILGIPFVNLEKEIIPKEVLQIIPEPIARKHNIISFRKRGKELEVAMLDPEDLQTIEFIKKKSDLKILPCLTTKESLKNTLKQYQKSLEAEFGELIKKEAKIISWPGKGLQKTKEELAKAAEEVSIIRIIDTLLKHAILQLASDIHIEPLEKEVIVRYRIDGILHDAMTLPKNIHSGLAARIKVLSNLKLDEHRLPQDGRFKIETNETKVSFRVSILPVYDGEKIVMRLLPENAKGLTLEILGLRGSPLEIIHQNIKKPNGMILVTGPTGCGKTTTLYTIMDILNTPEVNISTIEDPIEYRMPRINQTQVQPRIGLTFANGLRSLVRQDPDIIMVGEIRDNETASLAVNAALTGHLLLSTLHTNNAAGAFPRLIDMKVEPFLIGSTANVIIAQRLVRRLYPDSKKNYKLSQPEIKSLKEQFDLERVLNTLKQEKIIAPNLDWPDIEFYRPGESKECPDGYKGRFGIYEVLEVSQSIKDLITREATTDAIEVQAKKEGMFTMLEDGFVKAVQGMTSIEEVLRVTKXXXXXXXXXXXHELANNLRQEGLFLISAKKTGREEKTGRPDFGFLSLLNGLRHVSLVEKMMFSRHLAVMIEAGLSLNRALETLAKQSKNSKFRKIISQVEIDVRAGQSFSGALAKHPAAFNELYVNMVKAGETAGNLEEILKVLSEQMDKDHQLISRVRGAMMYPAVVLTAMVGIGVLMMVMVVPKLNETFIELKIDLPFTTRTIISVSNFLKNNLILGLVGLAAAVILLRLSVKTKSGQKIFHKFFLLLPPFGGIVQKVNSARLARTLSSLVNSGVAFVKALQITADTLGNIYFKEALFDSAQQVQKGKPLSQSLGKYKDLYPLMIIQMIQVGEETGSLSETLKTLADFYDEEVANLTKGLSSIIEPVLMVIIGAIVGFFAISMIQPMYSVMSGL*