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RIFCSPHIGHO2_01_FULL_OD1_40_12b_rifcsphigho2_01_scaffold_38649_2

Organism: Candidatus Portnoybacteria bacterium RIFCSPHIGHO2_02_FULL_39_12

near complete RP 44 / 55 MC: 1 BSCG 46 / 51 ASCG 12 / 38 MC: 1
Location: comp(548..1633)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor RpoD n=1 Tax=Butyrivibrio sp. AE3009 RepID=UPI0003B56417 similarity UNIREF
DB: UNIREF100
  • Identity: 32.9
  • Coverage: 337.0
  • Bit_score: 135
  • Evalue 1.20e-28
RNA polymerase sigma-70 subunit RpoD; K03086 RNA polymerase primary sigma factor Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_08_40_12b_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 361.0
  • Bit_score: 706
  • Evalue 1.80e-200
RNA polymerase sigma-70 subunit RpoD similarity KEGG
DB: KEGG
  • Identity: 32.5
  • Coverage: 338.0
  • Bit_score: 131
  • Evalue 6.40e-28

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Taxonomy

R_RIF_OD1_08_40_12b → RIF-OD1-8 → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 1086
ATGCCCGAAAAAATTAAAAATTCTTTTGAATCCACACCCCGAAAACCAAATAAAGAAAAGCCGGACAAAACATCGGAATTATTCCCTTTGCTAAAAGAGAGAATCTATTTTTTATACCGGCTGGAAATCGGCAAATTTCCTTTATTAACCCAGGCGGAAGAAGAATCTTTGGGGAGGAAAATTAACGCCGCCAGAGAAGAAATTGAAAAAGAAAGAGGGAAACAGAATCCTGAAATTATTGAACAAGGCAATGAAGCGGTCAATAAAATGGTTTGCGCTAATTTAAGATTGGCGCTGTCGGTTACAAACAAAGAATTTAAAGAATATCAGGAGCAGCAGCTTGATTTAATCCAGATAGGCAATATAGCTTTAATATCAGCAGCCAGAGAATTTGATATTGATAAGGGAATTAAGTTTTCCACTTACGCCTCTGAATGTATTAAGAATAAAATTAAAACCACTGTTACGGAAAAACAGGGATTGATTGAAATTCCCCATTATCTTTTTCCTATTTATCATATTTATAAGGAAGAAGAAGAAAAATTAAGGAAAGAATTAAAAATAAAGGGTTCATTATCATTAACAGAAAATGAAGAAGAAGTATTAATTCAAAGAACACATAACCGTCTTATAGAAAGTTACAAGACAAAGATTGATAAAGAAAGAACTAGAGAAATCCCCGAATACTTTGCGCTTCAGAAAGAACCAATTTCTTTGGAGCAAACAACACACCGGGGAGAAAAAGGGGTATCTTTAGAGGAAAAGCTGGCTGACACAGAGCATTCTTACGCTCAAGACCCTGAAAAACGGTTAGTCGGGGAAGCAGCTAAAGAAATAACCGATAAAATATTATTGGTCGCGGAATTGGGTTCGGATAAAGCGCTGAATTTATCTGACAAGGAGATGAAAATAATAAGGATGTTATTCGGTATAGATTATCCGGAACATACTTTTCAAGCAGTGGGTGATGAATTTGGAGTCAGCCGCGAGGCCATCCGCCAAAGAAAAGAAAGAATACTTGAAAAAATAAGGGGATACTTAAAAGAAACCGGCCAGTTTGATAAATTAAAAGAGGAAATTGAGTAA
PROTEIN sequence
Length: 362
MPEKIKNSFESTPRKPNKEKPDKTSELFPLLKERIYFLYRLEIGKFPLLTQAEEESLGRKINAAREEIEKERGKQNPEIIEQGNEAVNKMVCANLRLALSVTNKEFKEYQEQQLDLIQIGNIALISAAREFDIDKGIKFSTYASECIKNKIKTTVTEKQGLIEIPHYLFPIYHIYKEEEEKLRKELKIKGSLSLTENEEEVLIQRTHNRLIESYKTKIDKERTREIPEYFALQKEPISLEQTTHRGEKGVSLEEKLADTEHSYAQDPEKRLVGEAAKEITDKILLVAELGSDKALNLSDKEMKIIRMLFGIDYPEHTFQAVGDEFGVSREAIRQRKERILEKIRGYLKETGQFDKLKEEIE*