ggKbase home page
You are taken to the binning project of this organism.

RIFCSPHIGHO2_01_FULL_OD1_40_12b_rifcsphigho2_01_scaffold_16354_14

Organism: Candidatus Portnoybacteria bacterium RIFCSPHIGHO2_02_FULL_39_12

near complete RP 44 / 55 MC: 1 BSCG 46 / 51 ASCG 12 / 38 MC: 1
Location: comp(12543..14192)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA011-A09 RepID=UPI0003652C54 similarity UNIREF
DB: UNIREF100
  • Identity: 57.5
  • Coverage: 530.0
  • Bit_score: 624
  • Evalue 1.30e-175
pilB1; type IV-A pilus assembly ATPase PilB; K02652 type IV pilus assembly protein PilB Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_08_40_12b_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 549.0
  • Bit_score: 1060
  • Evalue 0.0
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 41.4
  • Coverage: 536.0
  • Bit_score: 410
  • Evalue 1.10e-111

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_RIF_OD1_08_40_12b → RIF-OD1-8 → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 1650
ATGGAGCTCCAAAATTTCGATAAAATGAGCAATCATCAAAATAAAGAAACAGAAGAAGTTCAAAAGAGGGCTAAAGAGCTTAAAGTGCCTTTTGCTGATTTAGCCAATAAAGATATTCCTGTTGAGGTCTTAAAAGAAATTCCCGAGGAGGCGGCCGCTTTTTATCAACTTATTCCCATAAAAAGAGATAAAGGGATTTTAGAAGTCGGCTTGGTTAATCCCGATGACTTGAAAGCCAGGGAGGCCTTGAGGTTTATTGCTTTGCGCAGCCAGCTGGAACCAAAGATATTTATTATCAAACCGACTGATTTTTTTAATGTTCTTAAGCAGTACCGGAGCTTGCGCGGCGAAGTTGAAAAGGCCCTTAAAGAACTGGAGCAGGAATTGAAAATAGAAGAAGTAAAAGCGCCGGCCGCTAAAATAAAACCAGAAGAACTGGTTCAAAAAATTACGGCCGAAGCGCCGGTGACTAAAATAGTCGCGGTTATTTTAAGGCATGCCACCGAAGGCCGGGCTTCGGATATTCACATTGAGCCGACAGAAGATAAAGTTAGGATTCGTTTCCGGGTTGACGGGGGCTTGCGCACCAGCCTTTTTTTACCGAAAGAAATTCATTCAGCTGTCATTTCGCGGATAAAGATTCTTTCCAATTTGAAAATTGACGAAACAAGGGTTCCCCAAGACGGCCGTTTTCATACTATTATTGATAAGAGAAAAATAGATTTTAGGGTTTCCACCCTGCCGACGGTGAGCGGAGAAAAAGCGGCTTTAAGGGTTTTGGATCCAAGTATCGGATTAAAAGGTTTTGCTGATTTGGGTCTTTTCGGTTATAATCTAAAGGCGCTTGAAGCAGCCATTGAAAAACCATTCGGGATGATTTTGATAACCGGGCCGACCGGCTCTGGCAAGACGACAACTCTTTATGCTATACTTAATGTGTTAAACCAAGAAGGAGTAAACATCATCAGTTTGGAAGATCCGGTTGAATATTATATTGAAGGAATTAATCAGTCTCAAATCAGGCCGGAAATCAACTATAGTTTTGCTTCGGGCCTCCGCAGTATTTTGCGTCAGGACCCCGATGTGATAATGGTGGGCGAAATCAGAGACGAAGAAACGGCCAGTTTGGCAATTCACGCGGCTTTGACCGGTCACATAGTCCTTTCTACTCTTCATACCAACAATGCGGTCGGCGTAATTCCCCGTTTGATTGATATGGGTGTGGGCGCTTTTCTTTTGCCTTCAGCTTTGAATTTAGCCGTGGCCCAACGTTTAATAAAACGGCTGTGCGAGGAATGCAAGAAAGAAGTGAGCGCCTCGCCGCAGATTACCGCTATTATTGAGGAAGAACTGGGGAAATTAAATCCGGAACATAAAAAGAAAATCGTTTGGAAAAAACCATATAAAGTTTATCAGGCCCAGGGTTGTAAGTTTTGCGCCAATAAGGGCACTAAAGGAAGAATCGCTCTTTTTGAGGTAGTTTTAATGACTCCAGCCTTAGAAGAAATTATTACTAAAAATCCGACTGAGGCGGCCATAGAAGAAGAGGCAAAAAAACAGGGAATGGTTACAATGAGACAGGACGGCGTTTTTAAGGCCCTTCAGGGTATTATTTCCTTTGAAGAGATGTTAAAGGCGGTGGAGGAGTAA
PROTEIN sequence
Length: 550
MELQNFDKMSNHQNKETEEVQKRAKELKVPFADLANKDIPVEVLKEIPEEAAAFYQLIPIKRDKGILEVGLVNPDDLKAREALRFIALRSQLEPKIFIIKPTDFFNVLKQYRSLRGEVEKALKELEQELKIEEVKAPAAKIKPEELVQKITAEAPVTKIVAVILRHATEGRASDIHIEPTEDKVRIRFRVDGGLRTSLFLPKEIHSAVISRIKILSNLKIDETRVPQDGRFHTIIDKRKIDFRVSTLPTVSGEKAALRVLDPSIGLKGFADLGLFGYNLKALEAAIEKPFGMILITGPTGSGKTTTLYAILNVLNQEGVNIISLEDPVEYYIEGINQSQIRPEINYSFASGLRSILRQDPDVIMVGEIRDEETASLAIHAALTGHIVLSTLHTNNAVGVIPRLIDMGVGAFLLPSALNLAVAQRLIKRLCEECKKEVSASPQITAIIEEELGKLNPEHKKKIVWKKPYKVYQAQGCKFCANKGTKGRIALFEVVLMTPALEEIITKNPTEAAIEEEAKKQGMVTMRQDGVFKALQGIISFEEMLKAVEE*