ggKbase home page

RIFCSPHIGHO2_01_FULL_OD1_43_120_rifcsphigho2_01_scaffold_11791_29

Organism: Candidatus Taylorbacteria bacterium RIFCSPHIGHO2_01_FULL_43_120

near complete RP 43 / 55 MC: 1 BSCG 43 / 51 MC: 1 ASCG 8 / 38
Location: comp(29298..30503)

Top 3 Functional Annotations

Value Algorithm Source
type II secretion system protein; K02653 type IV pilus assembly protein PilC Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 401.0
  • Bit_score: 760
  • Evalue 1.20e-216
Type II secretion system F domain; K02653 type IV pilus assembly protein PilC id=5803078 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome similarity UNIREF
DB: UNIREF100
  • Identity: 59.5
  • Coverage: 402.0
  • Bit_score: 482
  • Evalue 4.40e-133
type II secretion system protein similarity KEGG
DB: KEGG
  • Identity: 37.1
  • Coverage: 404.0
  • Bit_score: 259
  • Evalue 2.20e-66

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RLO_RIF_OD1_11_43_20 → RIF-OD1-11 → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 1206
ATGTTATTTAACTACAAAGCCATAGATACTACTGGAGTTCCCAGGGAGGGCGCCATAGACGCCATCAATGTAGATATTGCCATCAATTCTTTGCAGAGGCGCGGTTTATCGGTGTCCAGCATAAAGGCGGAAGAGAAAGAATCTTTTCTTACGAAAAAATTCACTTTTCTCGAGCGGGTTTCAAATAAAGACATAGTCATACTTTCTCGGCAATTGTCCACTTTGTTTGAAGCGCAGATATCGGCGTTGAGGATATTCCGACTGTTGGGTTCCGAAACGTCCAACCATCTTTTGAGCGTTACCTTAAATGCCGTGGCCGACGATCTTCAGGGGGGCAGTTCAATATCCAACGCTCTATCCAAGCACCCCAAGGTTTTTTCCAGTTTCTACATAAATATGGTAAAGGCGGGCGAGGAGTCGGGAAAGCTCAACGATGTCTTTATGTACTTGGCGGACTATATGGACCGCACTTACGAAGTGACTTCAAAGGCCAAAAACGCCTTGATATACCCGGCGTTTGTCGTCTTTACTTTTGTGGCTGTTATGTCTTTGATGCTAACTGTTGTCATCCCCAAGATAAGCCAGATTATCGTAGACTCGGGGCAGGACATTCCTCTCTATACTCAAATAGTGTTGAGTATTAGCGACTTTTTTGTGGCGTACGGACTTATATTTCTGGTTGCCGTCATTGTCGGATTTTTCTTTTTTATAAAGTATATCCACACAAGAGAAGGCAGATTTCAATTTGATAAATTTAAGCTCACCATACCTTATCTTGGCACGTTGTATAAAAAATTATATCTTTCCAGAATAGCCGATAACTTGAACACCATGCTTGTGTCCGCCATTCCGATTTTGAAAGCTCTGGAAATAACTTCCGATGTCGTTGGTAATGCCTATTACGAAACAATTCTGAAACAGATAGCCGAGGATGTGAAAGGCGGTAATTCCTTATCATCAGCTTTTGAAAAATATGAAGAGATGCCGGGCATTCTTATACAAATGATCAAGGTGGGGGAGGAGTCTGGTGAGCTTGGCAGTATATTGGCGAGCTTGGCAAAGTTTTACCGCAGAGAAGTTACGAACGCCGTGGACACCATGGTGGGGCTCATAGAGCCGGTGATGATTGTCGGTCTCGGAGTAGGCGTGGCTGTTCTTCTCGCTTCTGTCCTTATTCCCATATACAATATATCCTCCAACGCCTAA
PROTEIN sequence
Length: 402
MLFNYKAIDTTGVPREGAIDAINVDIAINSLQRRGLSVSSIKAEEKESFLTKKFTFLERVSNKDIVILSRQLSTLFEAQISALRIFRLLGSETSNHLLSVTLNAVADDLQGGSSISNALSKHPKVFSSFYINMVKAGEESGKLNDVFMYLADYMDRTYEVTSKAKNALIYPAFVVFTFVAVMSLMLTVVIPKISQIIVDSGQDIPLYTQIVLSISDFFVAYGLIFLVAVIVGFFFFIKYIHTREGRFQFDKFKLTIPYLGTLYKKLYLSRIADNLNTMLVSAIPILKALEITSDVVGNAYYETILKQIAEDVKGGNSLSSAFEKYEEMPGILIQMIKVGEESGELGSILASLAKFYRREVTNAVDTMVGLIEPVMIVGLGVGVAVLLASVLIPIYNISSNA*