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RIFCSPHIGHO2_01_FULL_OD1_43_140_rifcsphigho2_01_scaffold_52515_5

Organism: Candidatus Giovannonibacteria bacterium RIFCSPHIGHO2_01_FULL_43_140

near complete RP 42 / 55 MC: 1 BSCG 43 / 51 ASCG 9 / 38
Location: 4698..6551

Top 3 Functional Annotations

Value Algorithm Source
Type IV secretory pathway VirB4 component-like protein {ECO:0000313|EMBL:KKT20928.1}; TaxID=1618656 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWC2 similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 617.0
  • Bit_score: 1204
  • Evalue 0.0
id=5227396 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria) similarity UNIREF
DB: UNIREF100
  • Identity: 68.5
  • Coverage: 597.0
  • Bit_score: 862
  • Evalue 2.40e-247
conjugal transfer protein TraC similarity KEGG
DB: KEGG
  • Identity: 48.9
  • Coverage: 579.0
  • Bit_score: 574
  • Evalue 4.90e-161

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Taxonomy

GWC2_OD1_43_8 → Giovannonibacteria → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 1854
ATGGCATTACTGAATATATTTAGAAAAAAGAAACCTAAAGAAACGGAAATTACTCCGGTTTTTCCGGAAGAAATTTATCGCGCCGGCGTTTTGGAATTAAAAGACGTTATCGCGCCAGCGGCGCTGGAAGTCACGGCCAATCACATGCGCCTTGGAGAAAAATTGGTGCGGACAATTTTTATTTTTTCGCTCCCCAGATTTCTTTCTTCAAACTGGTTTTCTCCCATAATAAATTTGGATAAGGTTTTTGATGTTTCCATATTTATACATCCGGTGAATACCGCAACAGTTTTAAAAAAACTTCAGCGGAAAGTCGCCGAAGTTCAATCGCAAGTTTCCATCCGGCAGGAAAAAGGATTGGTGCGAGACCCGATTTTGGACACCGCCTTCCAAGATTTGGAATCTTTGCGCGACAAGCTCCAGCAAGCGCAGGAAAGATTGTTCAATTTCGGGCTTTATATCGCGGTTTATGGAAATACTATAGAAGAGCTGGATAAAGCGGAGACTGAAATAAAATCCATGCTGGAGTCGCGTTTGGTTTATGCCAAGCCCGCGCTTTTTCAGCAAAAGGAAGCCATGGACTCTATTTTTCCCCAAGCTTTAGACACTCTTGGCGTCAACAATTATCTGAATTCCTCGCCCGCCTCCAGCGTTTTCCCATTTGTTTCTTTTGACCTCACTTCCAATAGGGGAATCCTTTACGGCATCAATTCGCATAATAATTCTCTGATTTTATTTGACCGCTTTAGTTTAGAAAATTATAACTCGGTAATTTTTGCCAAAGCCGGCGCCGGAAAATCTTACGCCACCAAACTGGAAATATTGCGCTCCTTAATGTTTGAAACGGATGTCATCGTTATAGACCCTGAAAAAGAATATGAATATTTGGCCGAAGCCGTTGGCGGAAGATATTTTAATATTTCTTTGACCTCGCACCACCACATCAATCCTTTTGATCTGCCGATGCCTCGGGAAGACGAATCGCCCGCTGATGTTTTGCGCTCGCACATTATAAATTTGGTGGGCCTTTTCAGAATTATGTTGGGCGGGTTAAACCCCGAGGAAGATTCCGTCATTGACCGCGCCATAACCGAAACCTACGCTTCGCGGGACATCACGCCGGACTCGAATTTCAGTAAAGCCACCCCGCCAATACTTTCCGATTTGGAGCTTGTTTTGGCCAATATGGAAGGAGGTGAAAGTTTAGCCCAACGCCTCCGAAAATTCACCAAAGGCACCTGGTCGGGATTTATCAACCAGCCGACCAATGTTGATATCAACCAAAAATGCGTTGTTTTTTCCGTCCGCGATATGGAGGATGATTTGCGTCCAGTGGCTACGTATTTAATAATCCACTATATCTGGAGCGCCATCCGCGCGAATATTAAAAAAAGATTACTGGTGGTGGACGAGGCCTGGTGGATTATGAAAAATGAAGACGGCGCTTCGTTTCTCTTTGGCATAGCCAAGCGCGCTAGAAAATATTACCTGGGCTTGGCCACTATCACCCAGGACGTCGGCGACTTTTTAAATTCGCCCTACGGAAAATCTTTGATTACCAATTCATCCATCCAAATTCTACTGCGCCAATCTCCAGCGTCAATTGATTTACTAAAACAAACTTTCAATCTTACGGATGAAGAAAAGTTTTTGCTCCTTGAGTCCGATGTCGGCGAAGGGCTCTTTTTCGCTGGATTAAAACACGTTGCCATAAAAATCTTAGCTTCTTACACTGAAGATCAGTTGATTACTTCCGACCCGGCCCAGCTCTTGGCGATTAAAAAAGCTAAAGAAGATTTTTCCCTGCCCGACCGGCAGGCGGGCGCCCAAGGCGAACAGGTATCACAAAAATAA
PROTEIN sequence
Length: 618
MALLNIFRKKKPKETEITPVFPEEIYRAGVLELKDVIAPAALEVTANHMRLGEKLVRTIFIFSLPRFLSSNWFSPIINLDKVFDVSIFIHPVNTATVLKKLQRKVAEVQSQVSIRQEKGLVRDPILDTAFQDLESLRDKLQQAQERLFNFGLYIAVYGNTIEELDKAETEIKSMLESRLVYAKPALFQQKEAMDSIFPQALDTLGVNNYLNSSPASSVFPFVSFDLTSNRGILYGINSHNNSLILFDRFSLENYNSVIFAKAGAGKSYATKLEILRSLMFETDVIVIDPEKEYEYLAEAVGGRYFNISLTSHHHINPFDLPMPREDESPADVLRSHIINLVGLFRIMLGGLNPEEDSVIDRAITETYASRDITPDSNFSKATPPILSDLELVLANMEGGESLAQRLRKFTKGTWSGFINQPTNVDINQKCVVFSVRDMEDDLRPVATYLIIHYIWSAIRANIKKRLLVVDEAWWIMKNEDGASFLFGIAKRARKYYLGLATITQDVGDFLNSPYGKSLITNSSIQILLRQSPASIDLLKQTFNLTDEEKFLLLESDVGEGLFFAGLKHVAIKILASYTEDQLITSDPAQLLAIKKAKEDFSLPDRQAGAQGEQVSQK*