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RIFCSPHIGHO2_01_FULL_OD1_45_28_rifcsphigho2_01_scaffold_130472_7

Organism: Candidatus Niyogibacteria bacterium RIFCSPHIGHO2_01_FULL_45_28

partial RP 38 / 55 BSCG 38 / 51 ASCG 9 / 38
Location: 3372..5366

Top 3 Functional Annotations

Value Algorithm Source
transcription-repair coupling factor Tax=RIFCSPLOWO2_01_FULL_OD1_45_48_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 664.0
  • Bit_score: 1310
  • Evalue 0.0
Transcription-repair coupling factor id=2824521 bin=GWC1_OD1_38_17 species=PER_GWF2_33_10 genus=PER_GWF2_33_10 taxon_order=PER_GWF2_33_10 taxon_class=PER_GWF2_33_10 phylum=PER tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation similarity UNIREF
DB: UNIREF100
  • Identity: 45.9
  • Coverage: 666.0
  • Bit_score: 570
  • Evalue 2.70e-159
transcription-repair coupling factor similarity KEGG
DB: KEGG
  • Identity: 39.8
  • Coverage: 616.0
  • Bit_score: 454
  • Evalue 6.00e-125

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Taxonomy

R_OD1_45_48 → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 1995
TTGCCGGATTTAGCAACAAAACAGCTTAATATTTTGCTTATTGCCGGGCTTACCCCATATTTTTTGGAAAAGCCCTTTTCGTGGTGGGAAGAAAATGAGGAAGAAATAATAAAAAAGCGCGAATTTAATCCGACATGGACCAAAAATACGGTTTTAGTTGAGGCCGGACAAAAAACAAAACAAAGCGAGTTTTTAAGACAAATTTCGGAATTGGGATACGAAAAGGTGTTCAATGCAATCTACCCGGGAACTTACAAAATTCTCGGATCAGCCGTAATTATTCACGCAATAAACAAAAAACTGCCTTTTGCGGTTGATTTTCTTGGAAACACAATTGAATCAATCACTTGGACATCCGATGTCCAAGTTGGTGCCGAACGTCCGATCTTGAGGACCAAAAACACTGAGCTTAATTTAGGGGACGGCGACTATGTGGTGCACATTGACCACGGCATAGGAATTTTTCGCGGAATTGTCGAAAAAGGGGGTTCACCCTCCCAAATTTCAAAAAGTGAAACTTGGGAGGGCAAGTATTTTAAAATTGAATACGCGCCCGCGAGAAAAGGCGGCGAGCCGGATGTTTTATTCGTGCCGACAGCAGAGAAAAAACGCCTTGAGCCGTATTACGGTCTTGAGCGGCCGCGCCTGGCTCGTCTGGGAACGCAGTTTTGGACCAAAGTTAAAAAAAGGTCTCGAGAAGAGATAATTGCGTTTGCCCAAGAACTCATAAAAATTCACAAAAACAGAGTCGTCCAAAAACGGCATCCGTATTTGCCGGACGAGCTTGAAAAAAATGTTTGGGACTCTTTCGAACACGAATTAACCAAAAGCCAAGAGCGCGCAATGGAGGAAATTTTCGCGGACATGGGACGCGATGAACCGATGGAAAGAGTCCTTACCGGAGATGTCGGTTTTGGAAAAACGGAGCTTGCGTTACGGGCATCACTTCGCTCGGCATTGAGCGGCAGGCAGACAGTAATACTTGCTCCCACAACAGTTCTGGCAGACCAGCATTTTTCGGTTTTTAAAAACCGGCTTCGCGATACACCCGTTAAAGTCGCCATGCTCTCGCGCCTCACTTCTAAAAAAGAAAATAAAAAAATATTAAAAGAACTTGAGGACGGCGAGTTAGATATCGCCATCGGCACTCACCGGTTGTTTTCAAAAGACATAAAATTCGGCAATTTGGGGCTGGTTGTTATAGACGAAGAACAGCGTTTCGGAGTCAGGCATAAAGAGCATTTTAAAAAACTGCATCCGGCATCCGACATCCTCTCTTTGTCCGCCACCCCGATTCCGAGAACACTCGCCTTCTTTCTTGCCGGCGTGCGTCCTGCCTCGCAAATCAAAGAGGCGCCTCGCGGTCGCTTGGCGCCTCTTACAAAGGTTCTACCATTTTCAAAGCGCCTCATCAAGGGAGCGATAAGGGCCGAGCTAAAACGCGAGGGACAAGTTTATTACGTTTCAAATCGTGTCCGAACAATTCCGAAAACTCTTGAAATGCTGGGCAGCCTCATCCCCCGCGCAAAACTCGGCTCAATCCACGGAAGAATGAACGAGGGCGACATCATTGAAACAATGCGCCGTTTCAGAAAAAAAGAAATAGATGTTTTAATTTCAACCACGATCATTGAAAACGGACTTGATATTTCTTCGGTCAATGCGTTGGTAGCCGAAAACGCGGCTCTCTTGGGACTTTCGCAAGCGCATCAGTTAAGAGGTCGCATAGGACGGGGCGAGACGCAAGCAATGGCCTACTTTTTATATAACCCCAAGAATCTCCCGCCCAAAGCCGAAAAACGGCTCGCGAACTTGCTTGATTTTCAGGAATTGGGTTCGGGGCTTGAAATCGCCAAGCGAGATTTGGAAATAAGAGGCGCAGGAAACATTTTGGGCCGTGAGCAGTCTGGCATCGCCAACCGCATCGGCTGGAATCTGTATTTCCAATTCATGAACGAGGTAGTTGAAGATCTTGCGCGACCAGACTTTGAATGA
PROTEIN sequence
Length: 665
LPDLATKQLNILLIAGLTPYFLEKPFSWWEENEEEIIKKREFNPTWTKNTVLVEAGQKTKQSEFLRQISELGYEKVFNAIYPGTYKILGSAVIIHAINKKLPFAVDFLGNTIESITWTSDVQVGAERPILRTKNTELNLGDGDYVVHIDHGIGIFRGIVEKGGSPSQISKSETWEGKYFKIEYAPARKGGEPDVLFVPTAEKKRLEPYYGLERPRLARLGTQFWTKVKKRSREEIIAFAQELIKIHKNRVVQKRHPYLPDELEKNVWDSFEHELTKSQERAMEEIFADMGRDEPMERVLTGDVGFGKTELALRASLRSALSGRQTVILAPTTVLADQHFSVFKNRLRDTPVKVAMLSRLTSKKENKKILKELEDGELDIAIGTHRLFSKDIKFGNLGLVVIDEEQRFGVRHKEHFKKLHPASDILSLSATPIPRTLAFFLAGVRPASQIKEAPRGRLAPLTKVLPFSKRLIKGAIRAELKREGQVYYVSNRVRTIPKTLEMLGSLIPRAKLGSIHGRMNEGDIIETMRRFRKKEIDVLISTTIIENGLDISSVNALVAENAALLGLSQAHQLRGRIGRGETQAMAYFLYNPKNLPPKAEKRLANLLDFQELGSGLEIAKRDLEIRGAGNILGREQSGIANRIGWNLYFQFMNEVVEDLARPDFE*