ggKbase home page

RIFCSPHIGHO2_01_FULL_OD1_45_28_rifcsphigho2_01_scaffold_19086_8

Organism: Candidatus Niyogibacteria bacterium RIFCSPHIGHO2_01_FULL_45_28

partial RP 38 / 55 BSCG 38 / 51 ASCG 9 / 38
Location: 8013..9119

Top 3 Functional Annotations

Value Algorithm Source
protein MnmA; K00566 tRNA-specific 2-thiouridylase [EC:2.8.1.-] Tax=RIFCSPLOWO2_01_FULL_OD1_45_48_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 368.0
  • Bit_score: 749
  • Evalue 1.90e-213
tRNA-specific 2-thiouridylase MnmA id=4242101 bin=GWC2_OD1_43_27 species=Bacillus cellulosilyticus genus=Bacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWC2_OD1_43_27 organism_group=OD1 (Parcubacteria) organism_desc=Same as C1_43_61 and D1_43_18 Curated this version (complete) similarity UNIREF
DB: UNIREF100
  • Identity: 55.1
  • Coverage: 401.0
  • Bit_score: 418
  • Evalue 9.40e-114
thiouridylase similarity KEGG
DB: KEGG
  • Identity: 50.1
  • Coverage: 369.0
  • Bit_score: 349
  • Evalue 1.20e-93

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_OD1_45_48 → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 1107
ATGAAAAGTCAAGTTAAAAAGCCGAAGGTCTTCGTGGCCATGTCTGGAGGAGTGGACTCGTCTGTTGCGGCCGCTTTGCTTAAAAAGGGCGGTGAATTCAGTGTGGTCGGATGTTATATGAAATGCTGGTCGGCTTGGGATCAGTGCTCGGTTGAGCGCGATGCCGAAGACGCGAGGGCTGTTGCGGAAAAATTAGATATACCCTTTTATATTTTTGATTTTGAGAAAGAGTATCGCGAGCGAGTTTTTAATTACATGGTTAGAGAATATGCCGCAGGGCGCACGCCTAACCCCGATGTGCTTTGCAACTCGGAAATTAAATTCGGAATTTTTTTGGAGAAAGCGCTGGCCCTAGGCGCAGATTTTGTGGCAACGGGGCATTATGTGAGAGCCTCCGAAAGCTTTTCAGAACAGAACGCCGTCTCGCTTTGTCAGGCCGTGGACCAAAATAAAGACCAAAGTTATTTTTTGTGGCGTCTTACGCAAAAACAGCTTAAACATGTTTTGTTTCCGATAGGGGATTATTTAAAACCCGAAGTTCGCGAAATGGCGCGCGAGTTTGGATTGCCGACTGCGGATAAAAAAGATTCGCAGGGGCTTTGTTTTGTGGGAAAAGTGCCGTTTGACGAATTTTTACGCGATATTTTACCAAAAAATCCCGGGCCGATTATGACTACTTCCGGAAAGGTGATAGGCGATCATGACGGCCTTTCGTTTTACACTTTGGGTCAGCGCCACGGCATTAAAATAGGCGGAGGGACGCCCTATTATGTCGCGTCAAAAGAATTTCAGACCAACACTTTGGTTGTGGCCGAAGGAAATAAAGACGAGATACTTTTTAAAAAAGAAATTGAAGTCTCGGACATAAATTGGATTGGAGGCGCCCAACCAAAATTTCCTTTAAAATGCAAAGCGCGCATCCGTTACCGCCAGCCTCTTCAAAAATGCGCCGTATTCCCACTTGGACATCGGATGTCCAAGTTAAGGGTTGTGTTTGATGAACCGCAAAAAGCCGCAACCCCGGGCCAGTCGGCTGTATTTTACGTGCCCGCCAAAGCTTTAGTGAAGGAGGGTGGAGAACTTCTGGGTGGAGGGGTAATGGTGTAA
PROTEIN sequence
Length: 369
MKSQVKKPKVFVAMSGGVDSSVAAALLKKGGEFSVVGCYMKCWSAWDQCSVERDAEDARAVAEKLDIPFYIFDFEKEYRERVFNYMVREYAAGRTPNPDVLCNSEIKFGIFLEKALALGADFVATGHYVRASESFSEQNAVSLCQAVDQNKDQSYFLWRLTQKQLKHVLFPIGDYLKPEVREMAREFGLPTADKKDSQGLCFVGKVPFDEFLRDILPKNPGPIMTTSGKVIGDHDGLSFYTLGQRHGIKIGGGTPYYVASKEFQTNTLVVAEGNKDEILFKKEIEVSDINWIGGAQPKFPLKCKARIRYRQPLQKCAVFPLGHRMSKLRVVFDEPQKAATPGQSAVFYVPAKALVKEGGELLGGGVMV*