ggKbase home page

RIFCSPHIGHO2_01_FULL_OD1_45_28_rifcsphigho2_01_scaffold_36288_4

Organism: Candidatus Niyogibacteria bacterium RIFCSPHIGHO2_01_FULL_45_28

partial RP 38 / 55 BSCG 38 / 51 ASCG 9 / 38
Location: comp(2716..3615)

Top 3 Functional Annotations

Value Algorithm Source
MiaA; tRNA delta(2)-isopentenylpyrophosphate transferase; K00791 tRNA dimethylallyltransferase [EC:2.5.1.75] Tax=RIFCSPLOWO2_01_FULL_OD1_45_48_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 299.0
  • Bit_score: 592
  • Evalue 2.40e-166
tRNA dimethylallyltransferase id=3736869 bin=GWC2_OD1_43_27 species=Geobacter sp. M18 genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_OD1_43_27 organism_group=OD1 (Parcubacteria) organism_desc=Same as C1_43_61 and D1_43_18 Curated this version (complete) similarity UNIREF
DB: UNIREF100
  • Identity: 52.4
  • Coverage: 286.0
  • Bit_score: 292
  • Evalue 6.30e-76
MiaA; tRNA delta(2)-isopentenylpyrophosphate transferase similarity KEGG
DB: KEGG
  • Identity: 39.1
  • Coverage: 297.0
  • Bit_score: 209
  • Evalue 1.20e-51

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_OD1_45_48 → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 900
ATGAAATCCCCTGTCAACAGAAAAATCATAGTGATAGTCGGGCCGACAGCATCGGGAAAATCGGCGCTTGGGGTTAAACTTGCCAAAAAACTGAACGGCGAGATAATTTCGGCCGATTCGCGGCAAGTTTATAAAGGATTAGACTTGGCTTCCGGTAAAATTACTAAAAAAGAAATGGCCGGCATCCCCCACCACTGCCTTGATTTGATTAGCCCAAAAACAATCTTCACGGCTGAAAGTTACGCAAAATCCGCGCAAAAGGCCGTCAAAGACATATTAAAACACGGAAAAACGCCGATAATAGTCGGCGGAACGGGATTTTACATAGATATTGCCATCGGGCGGATGAAAACGGCGGGTGTCGCGCCCGACTGGAAACTGCGTCGTATGCTTGAGAAAAAAACCGCGGAAACTCTTTTAAAAATGCTCAAAAAATTTGATCCCGCGCGGGCGAAAACGGTTGAACCCCAAAACAAACGCCGTCTTATTCGTGCGATTGAAGTCGCGAAATTCTCAAAGAAAAAAGGTTTTAAAAAGCAAAATATATTGATATATCAATATATTAATGATGCTGATTTGGTGTGGTTGGGCATAAAAATAAAACCCGAAGAATTAAGAAAGAGAATAAACACGAGACTCGAAAAACGCTTAAAGGCCGGAATGATAAATGAAATAAAAAAACTGCGTAGGCAAGGAGTAAGCTGGAAACGATTAGACGATTTAGGCCTTGAGCCTCGTTGGATTTCAAGATATTTGCGCGGACTTATCGGTAAAGAAGAAATGGTACAAAAACTTCAAACCGCCATCTGGCGCTATTCCCGCCGGCAAATGACCTGGTTTCGCCGCAATAAAAAAATCAAGTGGGTCGCACCTAAAGCAGACTTGTTAAAATTTTTCTGA
PROTEIN sequence
Length: 300
MKSPVNRKIIVIVGPTASGKSALGVKLAKKLNGEIISADSRQVYKGLDLASGKITKKEMAGIPHHCLDLISPKTIFTAESYAKSAQKAVKDILKHGKTPIIVGGTGFYIDIAIGRMKTAGVAPDWKLRRMLEKKTAETLLKMLKKFDPARAKTVEPQNKRRLIRAIEVAKFSKKKGFKKQNILIYQYINDADLVWLGIKIKPEELRKRINTRLEKRLKAGMINEIKKLRRQGVSWKRLDDLGLEPRWISRYLRGLIGKEEMVQKLQTAIWRYSRRQMTWFRRNKKIKWVAPKADLLKFF*