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RIFCSPHIGHO2_01_FULL_OD1_48_180_rifcsphigho2_01_scaffold_1509

Search features with annotation key words

Displaying items 31-60 of 65 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPHIGHO2_01_FULL_OD1_48_180_rifcsphigho2_01_scaffold_1509_31
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

comp(32713..34356)
DNA (1644bp) protein (548aa)
type II secretion system protein E; K02652 type IV pilus assembly protein PilB Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
Tfp pilus assembly protein PilB; K02652 type IV pilus assembly protein PilB id=88808 bin=ACD5 species=ACD5 genus=ACD5 taxon_order=ACD5 taxon_class=ACD5 phylum=OD1 tax=ACD5 organism_group=OD1-i organism_desc=OD1-i
type II secretion system protein E
RIFCSPHIGHO2_01_FULL_OD1_48_180_rifcsphigho2_01_scaffold_1509_32
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

comp(34436..35581)
DNA (1146bp) protein (382aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1ZHL7_9BACT
exopolyphosphatase-like protein; K06881 phosphoesterase RecJ domain-containing protein Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
exopolyphosphatase-like protein
RIFCSPHIGHO2_01_FULL_OD1_48_180_rifcsphigho2_01_scaffold_1509_33
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

35668..36093
DNA (426bp) protein (142aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1Z216_9BACT
putative ATP/GTP hydrolase Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
putative ATP/GTP hydrolase
RIFCSPHIGHO2_01_FULL_OD1_48_180_rifcsphigho2_01_scaffold_1509_34
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

36050..37396
DNA (1347bp) protein (449aa)
VanW family protein n=1 Tax=uncultured bacterium RepID=K2FRS9_9BACT
von Willebrand factor A Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
von Willebrand factor A
RIFCSPHIGHO2_01_FULL_OD1_48_180_rifcsphigho2_01_scaffold_1509_35
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

37412..38887
DNA (1476bp) protein (492aa)
leucyl aminopeptidase (EC:3.4.11.1); K01255 leucyl aminopeptidase [EC:3.4.11.1] Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
leucyl aminopeptidase (EC:3.4.11.1)
Probable cytosol aminopeptidase id=3900885 bin=GWF2_Syntrophobacterales_56_9 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Syntrophobacterales_56_9 organism_group=Deltaproteobacteria
RIFCSPHIGHO2_01_FULL_OD1_48_180_rifcsphigho2_01_scaffold_1509_36
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

38916..39962
DNA (1047bp) protein (349aa)
Holliday junction DNA helicase RuvB; K03551 holliday junction DNA helicase RuvB [EC:3.6.4.12] Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
tjr:TherJR_1182 Holliday junction DNA helicase RuvB; K03551 holliday junction DNA helicase RuvB id=87237 bin=ACD58 species=ACD58 genus=ACD58 taxon_order=ACD58 taxon_class=ACD58 phylum=ACD58 tax=ACD58 organism_group=ACD58 (Berkelbacteria) organism_desc=ACD58
Holliday junction DNA helicase RuvB
RIFCSPHIGHO2_01_FULL_OD1_48_180_rifcsphigho2_01_scaffold_1509_37
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

39968..40186
DNA (219bp) protein (73aa)
Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
RIFCSPHIGHO2_01_FULL_OD1_48_180_rifcsphigho2_01_scaffold_1509_38
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

40183..40740
DNA (558bp) protein (186aa)
hypothetical protein
Uncharacterized protein Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
transmembrane_regions 65..86 id=96341 bin=ACD63 species=ACD63 genus=ACD63 taxon_order=ACD63 taxon_class=ACD63 phylum=OD1 tax=ACD63 organism_group=OD1 (Parcubacteria) organism_desc=OD1
RIFCSPHIGHO2_01_FULL_OD1_48_180_rifcsphigho2_01_scaffold_1509_39
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

40737..41159
DNA (423bp) protein (141aa)
tagD; glycerol-3-phosphate cytidylyltransferase (EC:2.7.7.39) Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
tagD; glycerol-3-phosphate cytidylyltransferase (EC:2.7.7.39)
Glycerol-3-phosphate cytidylyltransferase id=2598231 bin=GWC1_OD1_38_17 species=GW2011_OD1_1 genus=GW2011_OD1_1 taxon_order=GW2011_OD1_1 taxon_class=GW2011_OD1_1 phylum=OD1 tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
RIFCSPHIGHO2_01_FULL_OD1_48_180_rifcsphigho2_01_scaffold_1509_40
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

41162..42601
DNA (1440bp) protein (480aa)
polysaccharide biosynthesis protein Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
Polysaccharide biosynthesis protein, MviN-like family id=3415440 bin=GWA2_CPR4_42_17 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWA2_CPR4_42_17 organism_group=CPR4 organism_desc=from megabin
polysaccharide biosynthesis protein
RIFCSPHIGHO2_01_FULL_OD1_48_180_rifcsphigho2_01_scaffold_1509_41
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

42746..43633
DNA (888bp) protein (296aa)
RfaG8; glycosyltransferase Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
glycosyl transferase, group 1 id=96317 bin=ACD63 species=ACD63 genus=ACD63 taxon_order=ACD63 taxon_class=ACD63 phylum=OD1 tax=ACD63 organism_group=OD1 (Parcubacteria) organism_desc=OD1
group 1 glycosyl transferase
RIFCSPHIGHO2_01_FULL_OD1_48_180_rifcsphigho2_01_scaffold_1509_42
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

comp(43621..43905)
DNA (285bp) protein (95aa)
Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
RIFCSPHIGHO2_01_FULL_OD1_48_180_rifcsphigho2_01_scaffold_1509_43
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

comp(43905..44942)
DNA (1038bp) protein (346aa)
recF; DNA replication and repair protein RecF; K03629 DNA replication and repair protein RecF Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
DNA replication and repair protein RecF; K03629 DNA replication and repair protein RecF id=5094175 bin=PER_GWF2_33_10 species=PER_GWF2_33_10 genus=PER_GWF2_33_10 taxon_order=PER_GWF2_33_10 taxon_class=PER_GWF2_33_10 phylum=PER tax=PER_GWF2_33_10 organism_group=PER (Peregrinibacteria) organism_desc=No RuBisCO in this genome
recF; DNA replication and repair protein RecF
RIFCSPHIGHO2_01_FULL_OD1_48_180_rifcsphigho2_01_scaffold_1509_44
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

comp(45007..46101)
DNA (1095bp) protein (365aa)
dnaN; DNA polymerase III beta subunit (EC:2.7.7.7) Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
DNA polymerase III, beta subunit (EC:2.7.7.7); K02338 DNA polymerase III subunit beta [EC:2.7.7.7] id=95967 bin=ACD63 species=ACD63 genus=ACD63 taxon_order=ACD63 taxon_class=ACD63 phylum=OD1 tax=ACD63 organism_group=OD1 (Parcubacteria) organism_desc=OD1
DNA polymerase III subunit beta
RIFCSPHIGHO2_01_FULL_OD1_48_180_rifcsphigho2_01_scaffold_1509_45
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

comp(46309..47676)
DNA (1368bp) protein (456aa)
dnaA; chromosomal replication initiation protein; K02313 chromosomal replication initiator protein Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
chromosomal replication initiator protein DnaA id=4720341 bin=GWC2_CPR2_39_35 species=ACD18 genus=ACD18 taxon_order=ACD18 taxon_class=ACD18 phylum=OD1 tax=GWC2_CPR2_39_35 organism_group=CPR2 organism_desc=Candidate for curation
dnaA; Chromosomal replication initiator protein DnaA
RIFCSPHIGHO2_01_FULL_OD1_48_180_rifcsphigho2_01_scaffold_1509_46
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

48024..48365
DNA (342bp) protein (114aa)
Ribonuclease P protein component; K03536 ribonuclease P protein component [EC:3.1.26.5] Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
rnpA; ribonuclease P (EC:3.1.26.5)
Ribonuclease P protein component n=1 Tax=Thioalkalimicrobium aerophilum AL3 RepID=G4DA77_9GAMM
RIFCSPHIGHO2_01_FULL_OD1_48_180_rifcsphigho2_01_scaffold_1509_47
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

48362..48604
DNA (243bp) protein (81aa)
Putative membrane protein insertion efficiency factor n=1 Tax=uncultured bacterium (gcode 4) RepID=K1XJM3_9BACT
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
hypothetical protein
RIFCSPHIGHO2_01_FULL_OD1_48_180_rifcsphigho2_01_scaffold_1509_48
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

48601..49296
DNA (696bp) protein (232aa)
Preprotein translocase subunit YidC n=1 Tax=uncultured bacterium RepID=K1ZKX8_9BACT
60 kDa inner membrane insertion protein; K03217 preprotein translocase subunit YidC Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
60 kDa inner membrane insertion protein
RIFCSPHIGHO2_01_FULL_OD1_48_180_rifcsphigho2_01_scaffold_1509_49
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

49299..49757
DNA (459bp) protein (153aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2F2G7_9BACT
single-stranded nucleic acid binding R3H domain-containing protein; K06346 spoIIIJ-associated protein Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
single-stranded nucleic acid binding R3H domain-containing protein
RIFCSPHIGHO2_01_FULL_OD1_48_180_rifcsphigho2_01_scaffold_1509_50
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

comp(49735..51018)
DNA (1284bp) protein (428aa)
O-antigen polymerase n=1 Tax=uncultured bacterium RepID=K2AH44_9BACT
putative O-antigen ligase
O-antigen polymerase Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
RIFCSPHIGHO2_01_FULL_OD1_48_180_rifcsphigho2_01_scaffold_1509_51
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

comp(51021..53840)
DNA (2820bp) protein (940aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2B419_9BACT
1A family penicillin-binding protein Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
1A family penicillin-binding protein
RIFCSPHIGHO2_01_FULL_OD1_48_180_rifcsphigho2_01_scaffold_1509_52
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

53881..55059
DNA (1179bp) protein (393aa)
tyrS; tyrosyl-tRNA synthetase (EC:6.1.1.1); K01866 tyrosyl-tRNA synthetase [EC:6.1.1.1] Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
tyrS; tyrosyl-tRNA synthetase (EC:6.1.1.1)
Tyrosine--tRNA ligase n=1 Tax=Dictyoglomus thermophilum (strain ATCC 35947 / DSM 3960 / H-6-12) RepID=B5YF91_DICT6
RIFCSPHIGHO2_01_FULL_OD1_48_180_rifcsphigho2_01_scaffold_1509_53
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

55056..55250
DNA (195bp) protein (65aa)
Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
RIFCSPHIGHO2_01_FULL_OD1_48_180_rifcsphigho2_01_scaffold_1509_54
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

comp(55247..55900)
DNA (654bp) protein (218aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA011-A09 RepID=UPI00037CF162
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
RIFCSPHIGHO2_01_FULL_OD1_48_180_rifcsphigho2_01_scaffold_1509_55
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

comp(55890..56366)
DNA (477bp) protein (159aa)
ruvC; Holliday junction resolvase (EC:3.1.22.4); K01159 crossover junction endodeoxyribonuclease RuvC [EC:3.1.22.4] Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
ruvC; Holliday junction resolvase (EC:3.1.22.4)
Crossover junction endodeoxyribonuclease RuvC n=1 Tax=Paenibacillus sp. (strain JDR-2) RepID=C6D7Z3_PAESJ
RIFCSPHIGHO2_01_FULL_OD1_48_180_rifcsphigho2_01_scaffold_1509_56
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

comp(56363..57088)
DNA (726bp) protein (242aa)
Probable transcriptional regulatory protein Calni_1234 n=1 Tax=Calditerrivibrio nitroreducens (strain DSM 19672 / NBRC 101217 / Yu37-1) RepID=E4TJ10_CALNY
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
hypothetical protein
RIFCSPHIGHO2_01_FULL_OD1_48_180_rifcsphigho2_01_scaffold_1509_57
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

comp(57092..58435)
DNA (1344bp) protein (448aa)
Uncharacterized protein (Fragment) n=1 Tax=uncultured bacterium RepID=K2EAU2_9BACT
metallo-beta-lactamase family protein; K07576 metallo-beta-lactamase family protein Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
metallo-beta-lactamase family protein
RIFCSPHIGHO2_01_FULL_OD1_48_180_rifcsphigho2_01_scaffold_1509_58
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

comp(58492..58620)
DNA (129bp) protein (43aa)
Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
RIFCSPHIGHO2_01_FULL_OD1_48_180_rifcsphigho2_01_scaffold_1509_59
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

comp(58637..59620)
DNA (984bp) protein (328aa)
Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
RIFCSPHIGHO2_01_FULL_OD1_48_180_rifcsphigho2_01_scaffold_1509_60
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists


comp(59780..62299)
DNA (2520bp) protein (840aa)
DNA gyrase subunit A (EC:5.99.1.3); K02469 DNA gyrase subunit A [EC:5.99.1.3] Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
sti:Sthe_1721 DNA gyrase, A subunit (EC:5.99.1.3); K02469 DNA gyrase subunit A [EC:5.99.1.3] id=17033 bin=ACD1 species=ACD1 genus=ACD1 taxon_order=ACD1 taxon_class=ACD1 phylum=OD1-i tax=ACD1 organism_group=OD1-i organism_desc=OD1-i
DNA gyrase subunit A (EC:5.99.1.3)
Displaying items 31-60 of 65 in total

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