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RIFCSPHIGHO2_01_FULL_OD1_48_180_rifcsphigho2_01_scaffold_17267_4

Organism: Candidatus Doudnabacteria bacterium RIFCSPHIGHO2_01_FULL_48_180

near complete RP 44 / 55 MC: 1 BSCG 49 / 51 MC: 1 ASCG 7 / 38 MC: 1
Location: comp(1153..1776)

Top 3 Functional Annotations

Value Algorithm Source
putative pseudouridine synthase; K06180 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 207.0
  • Bit_score: 416
  • Evalue 2.20e-113
ribosomal large subunit pseudouridine synthase D (EC:5.4.99.-) id=15188673 bin=GWE1_Berkelbacteria_39_12 species=ACD58_39_12 genus=ACD58_39_12 taxon_order=ACD58_39_12 taxon_class=ACD58_39_12 phylum=ACD58 tax=GWE1_Berkelbacteria_39_12 organism_group=ACD58 (Berkelbacteria) organism_desc=Complete genome (ACD58 lineage) similarity UNIREF
DB: UNIREF100
  • Identity: 35.9
  • Coverage: 237.0
  • Bit_score: 148
  • Evalue 1.00e-32
putative pseudouridine synthase similarity KEGG
DB: KEGG
  • Identity: 39.8
  • Coverage: 249.0
  • Bit_score: 146
  • Evalue 6.40e-33

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Taxonomy

R_SM2F11_48_13 → SM2F11 → Bacteria

Sequences

DNA sequence
Length: 624
ATGACGATTGAATACGAAAATGATGATATAGTAATCATCAACAAACCAGCAGGACTCGCCGTACAAGACATTACGCAGTGGACACCTGCCCACAGGCTCGATAAACAGACATCCGGACTCTTGGCGCTGGCAAAAAATCAGCAGAGTTTGGATTTTTTGCGGAACTTGTTTAAATCAAGGGATATAACAAAAGAATACTTAGCGCTCGTCTATGGCCGCATAGAAAAACACGGAGTGATTGATAAGCCTTTGGTGAAAATCGGACACGAGGGATCCAGCAGGGTCAGGGTTCACGAATCCGGCCGCAAATCCGTGACCGAATACTGGCCTATTCAAAGCTACCGCCTGGGGGTTGACGAATTCACTTTGGTTAGGGTAAGATTGCATACGGGACGCACTCACCAGATTCGGGTACATTTTGCGCACATGAAGCATCCGGTCATGGGAGACGATCTTTACGGCAAGCCAAACTCGCGGATATTAAGTTCTATTCTTTCCCGACAATTCCTCCACGCTGCGAAACTTGAACTGAAACTGCCGGACAATACGTGGCTTGAGGTAGAATCAAAACTCCCCGAAGATTTACAAAAGGCTTTAGATAAATTATTAGAAGTAGTAAACTAG
PROTEIN sequence
Length: 208
MTIEYENDDIVIINKPAGLAVQDITQWTPAHRLDKQTSGLLALAKNQQSLDFLRNLFKSRDITKEYLALVYGRIEKHGVIDKPLVKIGHEGSSRVRVHESGRKSVTEYWPIQSYRLGVDEFTLVRVRLHTGRTHQIRVHFAHMKHPVMGDDLYGKPNSRILSSILSRQFLHAAKLELKLPDNTWLEVESKLPEDLQKALDKLLEVVN*