ggKbase home page

RIFCSPHIGHO2_01_FULL_OD1_50_25_rifcsphigho2_01_scaffold_4477_7

Organism: Candidatus Sungbacteria bacterium RIFCSPHIGHO2_01_FULL_50_25

near complete RP 38 / 55 BSCG 41 / 51 MC: 1 ASCG 7 / 38 MC: 1
Location: 5430..6041

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L3; K02906 large subunit ribosomal protein L3 Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_13_50_25_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 203.0
  • Bit_score: 400
  • Evalue 1.60e-108
rplC; Ribosomal protein L3; K02906 large subunit ribosomal protein L3 id=5802993 bin=OD1_GWC2_34_28 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome similarity UNIREF
DB: UNIREF100
  • Identity: 56.2
  • Coverage: 201.0
  • Bit_score: 235
  • Evalue 3.70e-59
50S ribosomal protein L3 similarity KEGG
DB: KEGG
  • Identity: 50.2
  • Coverage: 201.0
  • Bit_score: 210
  • Evalue 3.60e-52

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_RIF_OD1_13_50_25 → RIF-OD1-13 → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 612
ATGAAGATGCTTTTTGGAGAAAAACTTCATATGACTCAGGTTTTTGACGCATCGGGGAATGTCGTGCCGGTAACGCTTGTTCGTGCGCTTCCGAATGTCGTTCTCGGAGTGCGTACAAAAGAAAAAGACGGCTATCAGGCGGTTCAAGTTGGGTTTGGCGTGAAAAAAGAGAAAAAAATAAGAAAGCCGGAAAAAGGGCATTTCAAGGATCTTGGCATGTTCCGGCATGTGCGGGAGTTTCGTACTTCTGACCAGTTTGAGCGGGGAGCAAAGCTCGATGTCGCGCAATTTTCCGAGGGCGATACGATAAAAATTTCAGGTATTTCAAAGTCAAAAGGATTTCAGGGTGTGGTGAAGCGCCACGGCTTTCATGGCGCGCCCGCGACCCATGGGACAAAACACGCGCACCGCGAGCCCGGGTCCATCGGCGGAGGCGGGGGGCGGGCAGGAGGCCGCGTTGTCAAAGGCATGAAAATGGCGGGGCGCATGGGAGGCGAGCGCGTATCAGTGCGGAATTTAAAAATTGTGAAGGTTGATTCCGATAATAATGTTATCGCGGTTTTGGGGGCGATTCCGGGGAGGCGCGGAACACTCGTTGAAATTCGCGGATAA
PROTEIN sequence
Length: 204
MKMLFGEKLHMTQVFDASGNVVPVTLVRALPNVVLGVRTKEKDGYQAVQVGFGVKKEKKIRKPEKGHFKDLGMFRHVREFRTSDQFERGAKLDVAQFSEGDTIKISGISKSKGFQGVVKRHGFHGAPATHGTKHAHREPGSIGGGGGRAGGRVVKGMKMAGRMGGERVSVRNLKIVKVDSDNNVIAVLGAIPGRRGTLVEIRG*