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RIFCSPHIGHO2_01_FULL_OD1_50_67_rifcsphigho2_01_scaffold_2518

Search features with annotation key words

Displaying items 1-30 of 44 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPHIGHO2_01_FULL_OD1_50_67_rifcsphigho2_01_scaffold_2518_1
RHI_SM2F11_48_16, SM2F11, Bacteria

Not on your lists

2..1570
DNA (1569bp) protein (523aa)
Tax=RIFCSPHIGHO2_12_FULL_SM2F11_48_16_curated
RIFCSPHIGHO2_01_FULL_OD1_50_67_rifcsphigho2_01_scaffold_2518_2
RHI_SM2F11_48_16, SM2F11, Bacteria

Not on your lists

1667..2002
DNA (336bp) protein (112aa)
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_SM2F11_48_16_curated
hypothetical protein id=86910 bin=ACD58 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=ACD58 tax=ACD58 organism_group=ACD58 (Berkelbacteria) organism_desc=ACD58
RIFCSPHIGHO2_01_FULL_OD1_50_67_rifcsphigho2_01_scaffold_2518_3
RHI_SM2F11_48_16, SM2F11, Bacteria

Not on your lists

2163..2570
DNA (408bp) protein (136aa)
Tax=RIFCSPHIGHO2_12_FULL_SM2F11_48_16_curated
RIFCSPHIGHO2_01_FULL_OD1_50_67_rifcsphigho2_01_scaffold_2518_4
RHI_SM2F11_48_16, SM2F11, Bacteria

Not on your lists

2640..5192
DNA (2553bp) protein (851aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1ZZR1_9BACT
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_SM2F11_48_16_curated
hypothetical protein
RIFCSPHIGHO2_01_FULL_OD1_50_67_rifcsphigho2_01_scaffold_2518_5
RHI_SM2F11_48_16, SM2F11, Bacteria

Not on your lists

5205..5615
DNA (411bp) protein (137aa)
Tax=RIFCSPHIGHO2_12_FULL_SM2F11_48_16_curated
RIFCSPHIGHO2_01_FULL_OD1_50_67_rifcsphigho2_01_scaffold_2518_6
RHI_SM2F11_48_16, SM2F11, Bacteria

Not on your lists

5612..5809
DNA (198bp) protein (66aa)
Tax=RIFCSPHIGHO2_12_FULL_SM2F11_48_16_curated
RIFCSPHIGHO2_01_FULL_OD1_50_67_rifcsphigho2_01_scaffold_2518_7
RHI_SM2F11_48_16, SM2F11, Bacteria

Not on your lists


6008..6574
DNA (567bp) protein (189aa)
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_SM2F11_48_16_curated
50S ribosomal protein L7/L12 id=2899186 bin=GWC2_CPR2_39_35 species=candidate division TM7 single-cell isolate TM7c genus=unknown taxon_order=unknown taxon_class=unknown phylum=Candidatus Saccharibacteria tax=GWC2_CPR2_39_35 organism_group=CPR2 organism_desc=Candidate for curation
50S ribosomal protein L7/L12
RIFCSPHIGHO2_01_FULL_OD1_50_67_rifcsphigho2_01_scaffold_2518_8
RHI_SM2F11_48_16, SM2F11, Bacteria

Not on your lists

6578..6997
DNA (420bp) protein (140aa)
Membrane protein, GtrA superfamily Tax=RIFCSPHIGHO2_12_FULL_SM2F11_48_16_curated
Membrane protein, GtrA superfamily id=3012784 bin=GWC1_OD1_38_17 species=ACD81 genus=ACD81 taxon_order=ACD81 taxon_class=ACD81 phylum=OD1 tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
RIFCSPHIGHO2_01_FULL_OD1_50_67_rifcsphigho2_01_scaffold_2518_9
RHI_SM2F11_48_16, SM2F11, Bacteria

Not on your lists

7101..8603
DNA (1503bp) protein (501aa)
DNA polymerase III subunits gamma and tau (EC:2.7.7.7); K02343 DNA polymerase III subunit gamma/tau [EC:2.7.7.7] Tax=RIFCSPHIGHO2_12_FULL_SM2F11_48_16_curated
tjr:TherJR_0068 DNA polymerase III, subunits gamma and tau (EC:2.7.7.7); K02343 DNA polymerase III subunit gamma/tau [EC:2.7.7.7] id=96019 bin=ACD63 species=ACD63 genus=ACD63 taxon_order=ACD63 taxon_class=ACD63 phylum=OD1 tax=ACD63 organism_group=OD1 (Parcubacteria) organism_desc=OD1
DNA polymerase III subunits gamma and tau (EC:2.7.7.7)
RIFCSPHIGHO2_01_FULL_OD1_50_67_rifcsphigho2_01_scaffold_2518_10
RHI_SM2F11_48_16, SM2F11, Bacteria

Not on your lists

comp(8705..9997)
DNA (1293bp) protein (431aa)
Tax=RIFCSPHIGHO2_12_FULL_SM2F11_48_16_curated
RIFCSPHIGHO2_01_FULL_OD1_50_67_rifcsphigho2_01_scaffold_2518_11
RHI_SM2F11_48_16, SM2F11, Bacteria

Not on your lists

10477..10980
DNA (504bp) protein (168aa)
Uncharacterized protein n=1 Tax=Paenibacillus sp. JCM 10914 RepID=V9GC38_9BACL
Uncharacterized protein Tax=RIFCSPHIGHO2_12_FULL_SM2F11_48_16_curated
RIFCSPHIGHO2_01_FULL_OD1_50_67_rifcsphigho2_01_scaffold_2518_12
RHI_SM2F11_48_16, SM2F11, Bacteria

Not on your lists

11159..11533
DNA (375bp) protein (125aa)
Pyridoxamine 5'-phosphate oxidase n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6Y7N5_9RHIZ id=5103528 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
putative stress protein (general stress protein 26) Tax=RIFCSPHIGHO2_12_FULL_SM2F11_48_16_curated
Pyridoxamine 5'-phosphate oxidase
RIFCSPHIGHO2_01_FULL_OD1_50_67_rifcsphigho2_01_scaffold_2518_13
RHI_SM2F11_48_16, SM2F11, Bacteria

Not on your lists

11614..12054
DNA (441bp) protein (147aa)
Tax=RIFCSPHIGHO2_12_FULL_SM2F11_48_16_curated
RIFCSPHIGHO2_01_FULL_OD1_50_67_rifcsphigho2_01_scaffold_2518_14
RHI_SM2F11_48_16, SM2F11, Bacteria

Not on your lists

comp(12059..12382)
DNA (324bp) protein (108aa)
Thioredoxin n=1 Tax=Caloramator australicus RC3 RepID=I7KVV6_9CLOT
thioredoxin; K03671 thioredoxin 1 Tax=RIFCSPHIGHO2_12_FULL_SM2F11_48_16_curated
thioredoxin
RIFCSPHIGHO2_01_FULL_OD1_50_67_rifcsphigho2_01_scaffold_2518_15
RHI_SM2F11_48_16, SM2F11, Bacteria

Not on your lists

12467..13369
DNA (903bp) protein (301aa)
D-alanyl-D-alanine carboxypeptidase (EC:3.4.16.4); K07258 D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] Tax=RIFCSPHIGHO2_12_FULL_SM2F11_48_16_curated
serine-type D-Ala-D-Ala carboxypeptidase (EC:3.4.16.4); K07258 D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] id=5096067 bin=PER_GWF2_38_29 species=PER_GWF2_38_31 genus=PER_GWF2_38_31 taxon_order=PER_GWF2_38_31 taxon_class=PER_GWF2_38_31 phylum=PER tax=PER_GWF2_38_29 organism_group=PER (Peregrinibacteria)
D-alanyl-D-alanine carboxypeptidase (EC:3.4.16.4)
RIFCSPHIGHO2_01_FULL_OD1_50_67_rifcsphigho2_01_scaffold_2518_16
RHI_SM2F11_48_16, SM2F11, Bacteria

Not on your lists

13436..14482
DNA (1047bp) protein (349aa)
mraY; phospho-N-acetylmuramoyl-pentapeptide transferase (EC:2.7.8.13) Tax=RIFCSPHIGHO2_12_FULL_SM2F11_48_16_curated
Phospho-N-acetylmuramoyl-pentapeptide-transferase id=4838901 bin=GWC2_OD1_43_27 species=GW2011_OD1_1 genus=GW2011_OD1_1 taxon_order=GW2011_OD1_1 taxon_class=GW2011_OD1_1 phylum=OD1 tax=GWC2_OD1_43_27 organism_group=OD1 (Parcubacteria) organism_desc=Same as C1_43_61 and D1_43_18 Curated this version (complete)
hypothetical protein
RIFCSPHIGHO2_01_FULL_OD1_50_67_rifcsphigho2_01_scaffold_2518_17
RHI_SM2F11_48_16, SM2F11, Bacteria

Not on your lists

14482..16032
DNA (1551bp) protein (517aa)
d-aminoacylase; K06015 N-acyl-D-amino-acid deacylase [EC:3.5.1.81] Tax=RIFCSPHIGHO2_12_FULL_SM2F11_48_16_curated
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1ZC13_9BACT
d-aminoacylase
RIFCSPHIGHO2_01_FULL_OD1_50_67_rifcsphigho2_01_scaffold_2518_18
RHI_SM2F11_48_16, SM2F11, Bacteria

Not on your lists

16029..17255
DNA (1227bp) protein (409aa)
murD; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase (EC:6.3.2.9); K01925 UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] Tax=RIFCSPHIGHO2_12_FULL_SM2F11_48_16_curated
murD; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase (EC:6.3.2.9)
UDP-N-acetylmuramoylalanine--D-glutamate ligase n=1 Tax=uncultured bacterium RepID=K2FPH9_9BACT
RIFCSPHIGHO2_01_FULL_OD1_50_67_rifcsphigho2_01_scaffold_2518_19
RHI_SM2F11_48_16, SM2F11, Bacteria

Not on your lists

17252..18361
DNA (1110bp) protein (370aa)
stage V sporulation protein E; K03588 cell division protein FtsW Tax=RIFCSPHIGHO2_12_FULL_SM2F11_48_16_curated
stage V sporulation protein E; K03588 cell division protein FtsW id=2709 bin=ACD11 species=ACD11 genus=ACD11 taxon_order=ACD11 taxon_class=ACD11 phylum=OD1-i tax=ACD11 organism_group=OD1-i organism_desc=OD1-i
stage V sporulation protein E
RIFCSPHIGHO2_01_FULL_OD1_50_67_rifcsphigho2_01_scaffold_2518_20
RHI_SM2F11_48_16, SM2F11, Bacteria

Not on your lists

18361..20340
DNA (1980bp) protein (660aa)
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_SM2F11_48_16_curated
hypothetical protein id=136933 bin=ACD8 species=ACD8 genus=ACD8 taxon_order=ACD8 taxon_class=ACD8 phylum=OD1-i tax=ACD8 organism_group=OD1-i organism_desc=OD1-i
GDP-mannose 4,6 dehydratase ISS
RIFCSPHIGHO2_01_FULL_OD1_50_67_rifcsphigho2_01_scaffold_2518_21
RHI_SM2F11_48_16, SM2F11, Bacteria

Not on your lists

20424..22025
DNA (1602bp) protein (534aa)
integral membrane protein MviN; K03980 virulence factor Tax=RIFCSPHIGHO2_12_FULL_SM2F11_48_16_curated
mviN1; integral membrane protein MviN; K03980 virulence factor id=9290 bin=ACD15 species=ACD15 genus=ACD15 taxon_order=ACD15 taxon_class=ACD15 phylum=OD1-i tax=ACD15 organism_group=OD1-i organism_desc=OD1-i
mviN1; integral membrane protein MviN
RIFCSPHIGHO2_01_FULL_OD1_50_67_rifcsphigho2_01_scaffold_2518_22
RHI_SM2F11_48_16, SM2F11, Bacteria

Not on your lists

22015..24234
DNA (2220bp) protein (740aa)
Elongation factor 4 n=1 Tax=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) RepID=A9B6V9_HERA2
GTP-binding protein LepA; K03596 GTP-binding protein LepA Tax=RIFCSPHIGHO2_12_FULL_SM2F11_48_16_curated
GTP-binding protein LepA
RIFCSPHIGHO2_01_FULL_OD1_50_67_rifcsphigho2_01_scaffold_2518_23
RHI_SM2F11_48_16, SM2F11, Bacteria

Not on your lists

24237..24707
DNA (471bp) protein (157aa)
hypothetical protein n=1 Tax=Nonomuraea coxensis RepID=UPI00037714D1
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_SM2F11_48_16_curated
hypothetical protein
RIFCSPHIGHO2_01_FULL_OD1_50_67_rifcsphigho2_01_scaffold_2518_24
RHI_SM2F11_48_16, SM2F11, Bacteria

Not on your lists

24817..25188
DNA (372bp) protein (124aa)
coiled-coil 34..62 Tax=RIFCSPHIGHO2_12_FULL_SM2F11_48_16_curated
coiled-coil 34..62 id=138007 bin=ACD9 species=ACD9 genus=ACD9 taxon_order=ACD9 taxon_class=ACD9 phylum=OD1-i tax=ACD9 organism_group=OD1-i organism_desc=OD1-i
RIFCSPHIGHO2_01_FULL_OD1_50_67_rifcsphigho2_01_scaffold_2518_25
RHI_SM2F11_48_16, SM2F11, Bacteria

Not on your lists

25267..26118
DNA (852bp) protein (284aa)
hypothetical protein n=1 Tax=Bacillus massiliosenegalensis RepID=UPI0002D35E32
PpiC-type peptidyl-prolyl cis-trans isomerase Tax=RIFCSPHIGHO2_12_FULL_SM2F11_48_16_curated
PpiC-type peptidyl-prolyl cis-trans isomerase
RIFCSPHIGHO2_01_FULL_OD1_50_67_rifcsphigho2_01_scaffold_2518_26
RHI_SM2F11_48_16, SM2F11, Bacteria

Not on your lists

26379..27107
DNA (729bp) protein (243aa)
3-oxoacyl-[acyl-carrier-protein] reductase n=1 Tax=Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155) RepID=A0QZV5_MYCS2
short-chain dehydrogenase Tax=RIFCSPHIGHO2_12_FULL_SM2F11_48_16_curated
3-oxoacyl-ACP reductase
RIFCSPHIGHO2_01_FULL_OD1_50_67_rifcsphigho2_01_scaffold_2518_27
RHI_SM2F11_48_16, SM2F11, Bacteria

Not on your lists

27116..27409
DNA (294bp) protein (98aa)
Tax=RIFCSPHIGHO2_12_FULL_SM2F11_48_16_curated
RIFCSPHIGHO2_01_FULL_OD1_50_67_rifcsphigho2_01_scaffold_2518_28
RHI_SM2F11_48_16, SM2F11, Bacteria

Not on your lists

27402..27809
DNA (408bp) protein (136aa)
Mutator mutT protein n=1 Tax=Clostridium colicanis 209318 RepID=N9XJ98_9CLOT
hydrolase Tax=RIFCSPHIGHO2_12_FULL_SM2F11_48_16_curated
DNA mismatch repair protein MutT
RIFCSPHIGHO2_01_FULL_OD1_50_67_rifcsphigho2_01_scaffold_2518_29
RHI_SM2F11_48_16, SM2F11, Bacteria

Not on your lists

28174..30666
DNA (2493bp) protein (831aa)
Tax=RIFCSPHIGHO2_12_FULL_SM2F11_48_16_curated
RIFCSPHIGHO2_01_FULL_OD1_50_67_rifcsphigho2_01_scaffold_2518_30
RHI_SM2F11_48_16, SM2F11, Bacteria

Not on your lists

30783..32417
DNA (1635bp) protein (545aa)
ATPase; K03696 ATP-dependent Clp protease ATP-binding subunit ClpC Tax=RIFCSPHIGHO2_12_FULL_SM2F11_48_16_curated
ATP-dependent Clp protease ATPase subunit; K03696 ATP-dependent Clp protease ATP-binding subunit ClpC id=15190861 bin=GWC1_OP11_49_16_COMPLETE species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Firmicutes tax=GWC1_OP11_49_16_COMPLETE organism_group=OP11 (Microgenomates)
ATPase
Displaying items 1-30 of 44 in total

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