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RIFCSPHIGHO2_01_FULL_OD1_50_67_rifcsphigho2_01_scaffold_22103_21

Organism: Candidatus Doudnabacteria bacterium RIFCSPHIGHO2_01_FULL_50_67

near complete RP 48 / 55 MC: 3 BSCG 46 / 51 MC: 3 ASCG 10 / 38 MC: 2
Location: comp(13886..15127)

Top 3 Functional Annotations

Value Algorithm Source
RpoD subfamily RNA polymerase sigma-70 subunit; K03086 RNA polymerase primary sigma factor Tax=RIFCSPHIGHO2_02_FULL_SM2F11_43_13b_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 86.2
  • Coverage: 412.0
  • Bit_score: 681
  • Evalue 9.40e-193
RNA polymerase, sigma 70 subunit, RpoD subfamily; K03086 RNA polymerase primary sigma factor id=17196 bin=ACD1 species=ACD1 genus=ACD1 taxon_order=ACD1 taxon_class=ACD1 phylum=OD1-i tax=ACD1 organism_group=OD1-i organism_desc=OD1-i similarity UNIREF
DB: UNIREF100
  • Identity: 60.1
  • Coverage: 424.0
  • Bit_score: 466
  • Evalue 2.60e-128
RpoD subfamily RNA polymerase sigma-70 subunit similarity KEGG
DB: KEGG
  • Identity: 51.2
  • Coverage: 412.0
  • Bit_score: 392
  • Evalue 1.80e-106

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Taxonomy

R_SM2F11_43_13b → SM2F11 → Bacteria

Sequences

DNA sequence
Length: 1242
ATGCCTAAGTCCAAAAAGCCAATCAAGCGCAAACCGGCCAAGAAACTCAAGAAAGCCCCGAGCGCCAAACGCGCGCGCCGCTTGCCCAAACTTCGTCTTGTAGGCAAAGCCCGCAAGTTCAAAGAAAAACCCGCGGTTGCCAAGCCTGCGGTTTTGGATTGGGACCGCAAGATTGACGAACTGGTCAAGCGGGCCATGGGCCGGGGATTTTTGACCGAAGCGGAAGTGGTGCACGCCCTGCCGGAACTGGAGGAAAATATCACGGCCGTGGAGCGGCTGCTCGACACCCTGGATTCGAAAGGCTTGGAGCTGGTGGATCAGGAAATGGCCTCGGTCTGGCAGCAGGCCGTGGAATTCGCCCGGGTCAAAACCAAGAAAGAAGAGCAGCAGGCCGAATCTTACAACCTCGGGGACATTTATGATGACTCGATTCAGATGTATCTGCGCGAAATCGGCAAAACCTCGCTGCTCAAAGGCCCCGAGGAAGTCGAGCTGGCCAAACGGATCACCAAAGGCGACGTCGCCGCTCGTAAGCGATTGATTGAAGCCAACCTCCGGCTGGTCGTTTCGATTGCCAAAAAATATATGGGCCGCAACCTCGGCCTCCTGGACTTGATCCAGGAGGGCAACCTGGGACTGTTCCGCGCCGTGGAAAAATTCGACTGGCGCAAGGGCTATAAATTTTCCACTTACGCCACCTGGTGGATCCGCCAGGCCATCACCCGCGCGCTCGCTGACCAGTCCCGCACCATCCGCATCCCGGTCCACATGGTGGAAACGCTGAACAAATACGCCCAGGCCGAGCGTCAGTTGGTCCAGGATCTGGGCCGCGAGCCGTTGCCGGAAGAAATTGCTTCCGAAATGGGGATTGAAGTCGAGAAAGTTTACCAGCTCAAGAAAATTTCCCAGGAAACCGTGTCGATCGACACGCCGGTTGGGGACAGCGACGAGGAGGATTCCTACCTTGGCGACTTTATCGAGGATCCGGACTCAGTCACGCCCTCGGAAACCGCCGGCCGGCAGATTCTCAAAGAATACGTCCAAGGCATTATGAAGGATTTGGATCCGCGCGAGCAAAAAATTCTCAAAATGCGGTTTGGCTTGGAAGACGGCGTGACCCACACCCTGGAAGAAGTCGGCAAGGAGTTCGGCGTCACCCGCGAGCGCATCCGTCAGATCGAAGCCAAGGCCCTGGAGCGGATCAAAGAGCATTACAATATCAGCAAACTTCGGGATTACTAA
PROTEIN sequence
Length: 414
MPKSKKPIKRKPAKKLKKAPSAKRARRLPKLRLVGKARKFKEKPAVAKPAVLDWDRKIDELVKRAMGRGFLTEAEVVHALPELEENITAVERLLDTLDSKGLELVDQEMASVWQQAVEFARVKTKKEEQQAESYNLGDIYDDSIQMYLREIGKTSLLKGPEEVELAKRITKGDVAARKRLIEANLRLVVSIAKKYMGRNLGLLDLIQEGNLGLFRAVEKFDWRKGYKFSTYATWWIRQAITRALADQSRTIRIPVHMVETLNKYAQAERQLVQDLGREPLPEEIASEMGIEVEKVYQLKKISQETVSIDTPVGDSDEEDSYLGDFIEDPDSVTPSETAGRQILKEYVQGIMKDLDPREQKILKMRFGLEDGVTHTLEEVGKEFGVTRERIRQIEAKALERIKEHYNISKLRDY*