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RIFCSPHIGHO2_02_FULL_OD1_39_82_rifcsphigho2_02_scaffold_115807_2

Organism: Candidatus Zambryskibacteria bacterium RIFCSPHIGHO2_02_FULL_39_82

near complete RP 41 / 55 MC: 1 BSCG 42 / 51 MC: 1 ASCG 9 / 38
Location: 1736..3028

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor {ECO:0000313|EMBL:KKR32005.1}; TaxID=1618963 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWF2_39_8b.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 430.0
  • Bit_score: 832
  • Evalue 2.60e-238
RpoD subfamily RNA polymerase sigma-70 subunit; K03086 RNA polymerase primary sigma factor id=5803390 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome similarity UNIREF
DB: UNIREF100
  • Identity: 63.1
  • Coverage: 434.0
  • Bit_score: 514
  • Evalue 1.10e-142
RpoD; RNA polymerase sigma factor RpoD similarity KEGG
DB: KEGG
  • Identity: 52.9
  • Coverage: 367.0
  • Bit_score: 360
  • Evalue 5.90e-97

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Taxonomy

Parcubacteria bacterium GW2011_GWF2_39_8b → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 1293
ATGAAGAATAAAAAAATAAAAAAGAATAAGAAAGCCAAGGCGACCGCCAAAAAAAAGGTGGTGGCAAAAAAGTTTGTCAGGAAATTAAAGGGACGCAAGATAAAAGATGCAAAAATACCTACCGTACGGGTGAAAAAGAAAAATAAATCATCCCTAGCTATGAGGGCGGCAGGGACCATCAAACTGACCAAAGGTGCTCCAGTTTTGAAACGGGCTGATAGGCAAAGCCTTGGTATGGGGAAGCTTCTTTTAAAAGGTAAAGAGCGTGGATATGTTACATTTGACGAGATTTTGAAAGAATTTCCGACCATTGAGGAAGATATTATTTTTCTTGATGAATTATATGAGAAGCTCTCTGGTAGTGGTGTGGATATTTTGGAAGGTGGTGGACTGCTTGAGACTCCATCTGATGAGCTACAAAGTAAAAAGTATGCATACAGTGGTCGTAGCAGTGAAGGTTCGTATGACTCCATACAGATGTATCTCAAAGAAATCGGTCAGTATCCGCTTATCTCCGGTAGTATGGAAAAGGAATTGGCAAGAAGGATTGAAGCAGGAGATATTGAAGCCAAAAATCTCTTGGCTAGGGCCAACTTGCGTCTGGTGGTTTCTATTGCAAAGAAATATGTCGGACGCTCGGCTGACCTAACACTCCTTGACCTCATTCAAGAGGGAAATCTCGGACTTTTCAAAGCGGTGGATAAATTTGACTGGACAAAGGGTTACAAATTTTCAACATATGCCACTTGGTGGATACGCCAAGCTATTACTCGGGCTCTAGCTGACCAGTCTCGTACTATCCGCGTGCCGGTCCATATGGTGGAAACTATTGCCAAGTATAAACAGGTTGTCAGACGACTTTCCCAAGACCTCGGCAGAGACCCACTCCCAGAGGAAATTGCCACAGAAATGAATTTGGCTGTGGAAAAAATTTACACTATTGAAAAAATCGACCAGTCTACAGTATCCCTGGAAGCGCCGATAGGAGAGGATGATGACAGCAAAAGTAAACTCGGAGATTTTCTAGCGGACGACAAAATTCTTTCACCAGACCAAGAGTCTAGTAGACGTATTATCTCTGACCAGGTTAAGGAGATTTTGGGAGACTTGCCGGAAAAGGAAAGGAAAATTTTGGAACTTCGTCACGGCTTGACCGATGGCATCACACATACTTTAGAGGAAGTGGGAAAGGAGTTTGGGGTCACTCGCGAACGTATACGCCAGATTGAAGCTAAGGCGCACGAAAAGATTAGACAGCATGAAAAGATTAACCGCCTCCGAAATTACTATTAA
PROTEIN sequence
Length: 431
MKNKKIKKNKKAKATAKKKVVAKKFVRKLKGRKIKDAKIPTVRVKKKNKSSLAMRAAGTIKLTKGAPVLKRADRQSLGMGKLLLKGKERGYVTFDEILKEFPTIEEDIIFLDELYEKLSGSGVDILEGGGLLETPSDELQSKKYAYSGRSSEGSYDSIQMYLKEIGQYPLISGSMEKELARRIEAGDIEAKNLLARANLRLVVSIAKKYVGRSADLTLLDLIQEGNLGLFKAVDKFDWTKGYKFSTYATWWIRQAITRALADQSRTIRVPVHMVETIAKYKQVVRRLSQDLGRDPLPEEIATEMNLAVEKIYTIEKIDQSTVSLEAPIGEDDDSKSKLGDFLADDKILSPDQESSRRIISDQVKEILGDLPEKERKILELRHGLTDGITHTLEEVGKEFGVTRERIRQIEAKAHEKIRQHEKINRLRNYY*