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RIFCSPHIGHO2_02_FULL_OD1_48_21_rifcsphigho2_02_scaffold_15080_3

Organism: Candidatus Doudnabacteria bacterium RIFCSPHIGHO2_02_FULL_48_21

near complete RP 44 / 55 MC: 2 BSCG 49 / 51 MC: 1 ASCG 8 / 38
Location: 2694..3953

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma 38 subunit, RpoS; K03086 RNA polymerase primary sigma factor Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 419.0
  • Bit_score: 821
  • Evalue 7.70e-235
cth:Cthe_0895 RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor id=138208 bin=ACD9 species=ACD9 genus=ACD9 taxon_order=ACD9 taxon_class=ACD9 phylum=OD1-i tax=ACD9 organism_group=OD1-i organism_desc=OD1-i similarity UNIREF
DB: UNIREF100
  • Identity: 58.1
  • Coverage: 437.0
  • Bit_score: 461
  • Evalue 8.40e-127
RNA polymerase, sigma 38 subunit, RpoS similarity KEGG
DB: KEGG
  • Identity: 56.4
  • Coverage: 365.0
  • Bit_score: 390
  • Evalue 6.80e-106

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Taxonomy

R_SM2F11_48_13 → SM2F11 → Bacteria

Sequences

DNA sequence
Length: 1260
ATGAGTTCCAAGCAAAAAAAGCATAAAAAAACCAAAGGCAGCCACCGCTTGCGGCGCAGGCCGGTCCAAAAAAAGCCGAAAAAGAAACAACTTCGTTCGCGGCACGCAGTTCACCGGAAAAAAACTCCGCCCAGAGCTGAAAAGATAGCAGAGGTGGAGCATGCTTTTGATTGGGACAAGGCAGTTACCGATTTGGTGCACAAAGGACAGCAGCGCGGTTTTGTGACAGAATCGGAAATAATCCACGCTATGCCGCATCTTGAAGAAAATCTTACGGCCGTGGAAAAGGTTTTTTCCGAACTGGACCGTTTGGGGGTGGAGGTGGTTGATACTGAGGTGGCCTCGATTTGGGAGCAGGGTAAAACAGAACCTGAGGGACCGCGGTCCAAATCAGTAAGCGCCACGCCGGAGAGCTATGATTTGGGCGATATCTATGACGATTCGATTCAGATGTATTTGCGCGAGATTGGCAAAGTGTCACTTCTCAAGGGCAAAGAAGAGGTAGAGCTCGCGCAGCGCATCCAAAAAGGCGACGTCGCAGCGCGCAAGAAGCTTACTGAGGCCAACCTGCGCCTCGTGGTGTCCATTGCCAAAAAATACATGGGTCGCAACCTGGGGCTCCTCGATCTTATTCAGGAAGGCAATCTGGGGCTGTTCCGGGCTGTGGAAAAATTTGATTGGACCAAAGGCTACAAATTTTCCACCTACGCCACCTGGTGGATCAGGCAGGCGATAACCCGCGCCCTGGCTGACCAGTCGCGTACGATCCGCATCCCCGTGCACATGGTGGAGACCCTGAACAAATATGCGCAGGCCGAGCGCTCGCTCGTGCAGGAACTGGGCCGGGAGCCAACCGTGGAAGAGATTGCCGCGGAAATGGGTGTGGAGGTGTCAAAGGTCTTGCAACTGCAAAAAATCTCCCAGGAAACCGTCTCCATTGATACCGCGGTAGGGGATGAGGGCGATGAGGAAGACTCGAGGCTCGGTGATTTTATTGTGGACGAACAAACGTCGGTGCCGTCAGAATCTGCCGGCCGCCAGCTCCTGAAAGAATACGTCACTGAGGTCATGAAAGACCTGGATCCTCGCGAACAAAAAATCCTCAAGATGCGTTTTGGCCTGGAGGACGGGGTGACTCACACGCTCGAAGAGGTAGGCAAGGAGTTTGGGGTAACCCGCGAACGCATCCGTCAGATTGAAGCCAAGGCCCTTGAGCGCATCAAAGAACACCGCAATATCCAAAAACTTAGAGATTACTAG
PROTEIN sequence
Length: 420
MSSKQKKHKKTKGSHRLRRRPVQKKPKKKQLRSRHAVHRKKTPPRAEKIAEVEHAFDWDKAVTDLVHKGQQRGFVTESEIIHAMPHLEENLTAVEKVFSELDRLGVEVVDTEVASIWEQGKTEPEGPRSKSVSATPESYDLGDIYDDSIQMYLREIGKVSLLKGKEEVELAQRIQKGDVAARKKLTEANLRLVVSIAKKYMGRNLGLLDLIQEGNLGLFRAVEKFDWTKGYKFSTYATWWIRQAITRALADQSRTIRIPVHMVETLNKYAQAERSLVQELGREPTVEEIAAEMGVEVSKVLQLQKISQETVSIDTAVGDEGDEEDSRLGDFIVDEQTSVPSESAGRQLLKEYVTEVMKDLDPREQKILKMRFGLEDGVTHTLEEVGKEFGVTRERIRQIEAKALERIKEHRNIQKLRDY*