ggKbase home page

RIFCSPHIGHO2_12_FULL_OD1_44_17_rifcsphigho2_12_scaffold_22721_1

Organism: Candidatus Colwellbacteria bacterium RIFCSPHIGHO2_12_FULL_44_17

near complete RP 43 / 55 MC: 1 BSCG 44 / 51 MC: 1 ASCG 10 / 38 MC: 1
Location: comp(1..1164)

Top 3 Functional Annotations

Value Algorithm Source
polynucleotide phosphorylase/polyadenylase; K00962 polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] Tax=RIFCSPHIGHO2_12_FULL_OD1_44_17_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 388.0
  • Bit_score: 748
  • Evalue 5.90e-213
polynucleotide phosphorylase/polyadenylase; K00962 polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] Tax=RIFCSPHIGHO2_12_FULL_OD1_44_17_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 388.0
  • Bit_score: 748
  • Evalue 5.90e-213
pnpA; polynucleotide phosphorylase; K00962 polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] id=15189996 bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete similarity UNIREF
DB: UNIREF100
  • Identity: 52.4
  • Coverage: 389.0
  • Bit_score: 428
  • Evalue 9.60e-117

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RHI_OD1_44_17 → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 1164
ATGGATTTAGGAAGAAAAAAATTTACTCTTCAACTTGCAGGACGACCTCTCACGCTTGAGGTTTCTCGCCTCGCGGGACAGGCAAACGCGGCGGTTTTAGGTACTTACGGAGAAACAACCGTTCTTGTTACGGCTGTTATGAGTGATAAGGAGCGAACCGTCAACTATATGCCGCTTACCGTTGACTACGAGGAGAAGTTTTACGCCGCCGGGAAGATTATCGGAAGCCGATTTATTCGGCGTGAAGGGCGGCCGTCGGAAGAAGCAATTCTTTCGGGGCGTCTTGTTGATCGAGCGCTTCGACCGCTTTTTGATTCACGCATTCGGCGTGATATTCAAATTGTCGTGACTATTCTTTCAATTGATGAGGAGAATGATCCGGATCTTGTTTCGCTCATTACCGCTTCGGCGGCGCTTCTTATTTCTGATATTCCCTGGAGTGGGCCGGTTGCGGGCGTGCGCGTCGCGAAGATCGGCGATGAATTTGTTTTAAATCCTTTGCAAAGCCAGCTTAAAACAGACAACGGAGTTTCATACTCCTTTGAAACATTTGTTGCTGGCGTGGAGGACAGGATTAATATGATCGAGCTTTCCGGGGATGAAGCACCTGAGAGCGATGTTATAAAAGCTTTTGAGGTTGCCCAGAAGGAGGTCGCGAAAATTGTTGCTTTCCAGAAACAGATTGCGAAAGAAGTCGGCAAACCAAAGGCAACGATTACCTTACTTCAGCCAAAGGAGGGGCTTGTTCTTGAAGTTAAGAAATTTTTGGCGGATAAGCTTGAAGGGGCAATTTACGTTACTAATAAAAAAGAGCAACACGGTAACCTTGATGAGCTGAAGAGTGATCTTCTCTACCATCTTCGGGAATCTGAATTTTCAGGAGAAGATCTTGGCGTTGCAGAACTTCTTTTCGATGAGGAGGTTGATGTTATCGTCCACAAAAATATTCTTACATCAGAACGACGTCCGGACGAACGGAAGCTTGACCAAGTTCGTGATCTTTACGCAGAGGTAGGAACTTTACCGCGGACGCATGGCTCGGCAATTTTTGTGCGCGGTGACACGCAAGCTTTGGCGGTCGCGACAATCGCGCCGCCCGGAGCGGAACAGATGATTGAAACAATGGAGTTTTCAGGCAAACGGCGGTTTATGCTTCACTATAAT
PROTEIN sequence
Length: 388
MDLGRKKFTLQLAGRPLTLEVSRLAGQANAAVLGTYGETTVLVTAVMSDKERTVNYMPLTVDYEEKFYAAGKIIGSRFIRREGRPSEEAILSGRLVDRALRPLFDSRIRRDIQIVVTILSIDEENDPDLVSLITASAALLISDIPWSGPVAGVRVAKIGDEFVLNPLQSQLKTDNGVSYSFETFVAGVEDRINMIELSGDEAPESDVIKAFEVAQKEVAKIVAFQKQIAKEVGKPKATITLLQPKEGLVLEVKKFLADKLEGAIYVTNKKEQHGNLDELKSDLLYHLRESEFSGEDLGVAELLFDEEVDVIVHKNILTSERRPDERKLDQVRDLYAEVGTLPRTHGSAIFVRGDTQALAVATIAPPGAEQMIETMEFSGKRRFMLHYN