ggKbase home page

RIFCSPLOWO2_01_FULL_CPR_42_60_rifcsplowo2_01_scaffold_28_27

Organism: Candidatus Doudnabacteria bacterium RIFCSPLOWO2_01_FULL_42_60

near complete RP 45 / 55 MC: 1 BSCG 48 / 51 MC: 1 ASCG 9 / 38
Location: comp(24455..24850)

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S13; K02952 small subunit ribosomal protein S13 Tax=RIFCSPHIGHO2_12_FULL_SM2F11_42_22_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 131.0
  • Bit_score: 255
  • Evalue 5.30e-65
30S ribosomal protein S13 id=3013113 bin=GWC1_OD1_38_17 species=GW2011_OD1_1 genus=GW2011_OD1_1 taxon_order=GW2011_OD1_1 taxon_class=GW2011_OD1_1 phylum=OD1 tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation similarity UNIREF
DB: UNIREF100
  • Identity: 60.9
  • Coverage: 128.0
  • Bit_score: 167
  • Evalue 7.90e-39
rpsM; 30S ribosomal protein S13 similarity KEGG
DB: KEGG
  • Identity: 59.3
  • Coverage: 123.0
  • Bit_score: 156
  • Evalue 6.70e-36

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RHI_SM2F11_42_22 → SM2F11 → Bacteria

Sequences

DNA sequence
Length: 396
ATGGCGCTAGTAAGAATTGCAGGGGTGACCTTGCCACAACAAAAAAGAATCGAAGCCGCTCTCCCATATATCTTTGGTGTGGGTTGGCCTGCCAGCAAACGGATTTTAGCTGCTGCCAAAATCGATCCGAACAAACGAACTTCAGAATTGACCGAAGCCGAAGTTGCGAAAATTCGTGAATTTATAGAAAAGAACTACAGCGTCGAAGGAGCTCTTCGCCAAACAATTTCTTCTAATATCAAGTTGAAGAAAGAAATTGGTTCATATCAAGGCATCCGACATATCCGAGGACTTCCAGTAAGAGGACAGAGAACCAAAACTAATTCACGTACTCGTCGAGGTAACGTTAGACGAACAGCCGGATCAGGACGTAAAGCATCATCCGAGAAAACTTAA
PROTEIN sequence
Length: 132
MALVRIAGVTLPQQKRIEAALPYIFGVGWPASKRILAAAKIDPNKRTSELTEAEVAKIREFIEKNYSVEGALRQTISSNIKLKKEIGSYQGIRHIRGLPVRGQRTKTNSRTRRGNVRRTAGSGRKASSEKT*