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RIFCSPLOWO2_01_FULL_OD1_43_160_rifcsplowo2_01_scaffold_45692_3

Organism: Candidatus Giovannonibacteria bacterium RIFCSPLOWO2_01_FULL_43_160

near complete RP 43 / 55 MC: 1 BSCG 45 / 51 ASCG 9 / 38
Location: comp(1598..2635)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor {ECO:0000313|EMBL:KKT61277.1}; TaxID=1618648 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWA2_44_26.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 345.0
  • Bit_score: 693
  • Evalue 1.50e-196
RNA polymerase sigma factor id=2607520 bin=GWC1_OD1_38_17 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation similarity UNIREF
DB: UNIREF100
  • Identity: 45.3
  • Coverage: 344.0
  • Bit_score: 280
  • Evalue 2.20e-72
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 34.9
  • Coverage: 332.0
  • Bit_score: 198
  • Evalue 4.00e-48

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Taxonomy

Parcubacteria (Giovannonibacteria) bacterium GW2011_GWA2_44_26 → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 1038
ATGAAATACGATTTGCCGATTCATCCGGAGGAGGCGACTAAAAAACTGTTTACGGTATTGCCTAAAAGGACCAAAGATATTTTGGAACAACGTTTTGGATTGGGCAAAAATCCCAATCGGATGACTTTAGAAGCCATCGGGCAGAAGTACGGCATTACCCGCGAACGGGTGCGCCAAATAGAAGCGGACGGCTTTAACCGCATTAAAAAATCTCCCCAGCTAGGCGAGCTTAAAGAAATTTTTGCTTCTTTGGAAAATTATTTTGAAAAAGAAGGCCGAGTGATAAAAGAAGATAAAATTTTAAAAACTTTGGCGCCCCATCCCAAACACGAAAATCATATTTACTTTTTGCTTTCTTTGCACCAGTCCTTTGAAAGATTCCACGAGTCGGATGATCTGCACGAGCGCTGGACTTACGGCGAGGAAGCCCATGATGCCGCTAAACGTACACTGCAAGGCGCGGTGGATAAACTTAGAGAAATAGGCAAGCCGGTAGCGGAGCCCCAGCTTTTTGAAATTATTTCTTCTTTCGCGAAAAACGCTGGAGCGCTGTCTTTCGCCAATCAAGCGGTGCTTGCCAACTGGCTGATGCTTTCAAAAATGATTGCTAAAAATTATTTTGACCAATGGGGTTTGATTGAATTTCCGGAAATTAAACCGCGCGGAGTGAGAGACCTTTCGCACATGGTTTTGTCCCGCTACGGAAAGCCCTTGCATTTTTCCGCGGTGGCTTCCGGCATCGGCAAACTTATCGGCAAGCCCGTGCACACGCAGACAGTGCATAACGAACTCATAAAAGACAATCGCTTTGTTTTGGTAGGACGAGGCCTCTACGCGCTTAAAAACTGGGGTTATACCGCCGGAGTGGTTAAGGATGTGATTTCAGATGTTTTAGAAAAAAGTGGGCCCATGGCTAAAGAAAAAGTCATAGCCGCTGTTTTGAAACAACGCTTCGTAAAACCTAATACTGTATTCATCAATCTGGAGAACAAAAAATATTTCAAAAAACTCGCTGATGGTAAATATTCTCTTAAATGA
PROTEIN sequence
Length: 346
MKYDLPIHPEEATKKLFTVLPKRTKDILEQRFGLGKNPNRMTLEAIGQKYGITRERVRQIEADGFNRIKKSPQLGELKEIFASLENYFEKEGRVIKEDKILKTLAPHPKHENHIYFLLSLHQSFERFHESDDLHERWTYGEEAHDAAKRTLQGAVDKLREIGKPVAEPQLFEIISSFAKNAGALSFANQAVLANWLMLSKMIAKNYFDQWGLIEFPEIKPRGVRDLSHMVLSRYGKPLHFSAVASGIGKLIGKPVHTQTVHNELIKDNRFVLVGRGLYALKNWGYTAGVVKDVISDVLEKSGPMAKEKVIAAVLKQRFVKPNTVFINLENKKYFKKLADGKYSLK*