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RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_6255

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Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_6255_1
GWF2_OD1_38_8, Parcubacteria, Bacteria

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527..1306
DNA (780bp) protein (260aa)
Putative uncharacterized protein n=1 Tax=Candidatus Poribacteria sp. WGA-A3 RepID=D2MJ29_9BACT id=133815 bin=ACD81 species=Candidatus Poribacteria sp. WGA-A3 genus=unknown taxon_order=unknown taxon_class=unknown phylum=Poribacteria tax=ACD81 organism_group=OD1 (Parcubacteria) organism_desc=OD1
Putative uncharacterized protein Tax=GWF2_OD1_38_8
hypothetical protein
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_6255_2
GWF2_OD1_38_8, Parcubacteria, Bacteria

Not on your lists

1248..1706
DNA (459bp) protein (153aa)
Uncharacterized protein {ECO:0000313|EMBL:KKQ87949.1}; TaxID=1618961 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWF2_38_8.;"
Putative uncharacterized protein id=3736514 bin=GWC2_OD1_43_27 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWC2_OD1_43_27 organism_group=OD1 (Parcubacteria) organism_desc=Same as C1_43_61 and D1_43_18 Curated this version (complete)
hypothetical protein
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_6255_3
R_RIF_OD1_11_45_15b, RIF-OD1-11, Parcubacteria, Bacteria

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2045..2614
DNA (570bp) protein (190aa)
DNA polymerase V subunit; K03503 DNA polymerase V [EC:3.4.21.-] Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_11_45_15b_curated
DNA polymerase V subunit; K03503 DNA polymerase V [EC:3.4.21.-] id=5091491 bin=GWC2_PER_33_13 species=PER_GWC2_33_13 genus=PER_GWC2_33_13 taxon_order=PER_GWC2_33_13 taxon_class=PER_GWC2_33_13 phylum=PER tax=GWC2_PER_33_13 organism_group=PER (Peregrinibacteria) organism_desc=No RuBisCO in this genome
DNA polymerase V subunit
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_6255_4
RIFOXYD1_FULL_OD1_46_19_curated, Parcubacteria, Bacteria

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2733..2921
DNA (189bp) protein (63aa)
Tax=RIFOXYD1_FULL_OD1_46_19_curated
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_6255_5
R_RIF_OD1_11_45_15b, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

2934..4253
DNA (1320bp) protein (440aa)
nucleotidyltransferase/DNA polymerase protein; K02346 DNA polymerase IV [EC:2.7.7.7] Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_11_45_15b_curated
sat:SYN_00561 nucleotidyltransferase/DNA polymerase protein; K02346 DNA polymerase IV [EC:2.7.7.7] id=3406641 bin=GWC1_TM7_41_48 species=ACD43 genus=ACD43 taxon_order=ACD43 taxon_class=ACD43 phylum=OD1 tax=GWC1_TM7_41_48 organism_group=TM7
nucleotidyltransferase/DNA polymerase protein
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_6255_6
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

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comp(4494..4754)
DNA (261bp) protein (87aa)
Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_6255_7
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(5039..5221)
DNA (183bp) protein (61aa)
Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_6255_8
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

5499..6173
DNA (675bp) protein (225aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2A9I5_9BACT
winged helix family two component transcriptional regulator; K07665 two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43
winged helix family two component transcriptional regulator
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_6255_9
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

6379..8400
DNA (2022bp) protein (674aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
NarL family signal transduction histidine kinase id=5102538 bin=GWF1_WS6_37_7 species=WS6_GWF1_36_7 genus=WS6_GWF1_36_7 taxon_order=WS6_GWF1_36_7 taxon_class=WS6_GWF1_36_7 phylum=WS6 tax=GWF1_WS6_37_7 organism_group=WS6 (Doikabacteria)
hypothetical protein
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_6255_10
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

8384..8785
DNA (402bp) protein (134aa)
two-component DNA-binding response regulator; K07657 two-component system, OmpR family, phosphate regulon response regulator PhoB Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
Two component transcriptional regulator, winged helix family id=2823722 bin=GWC1_OD1_38_17 species=ACD43 genus=ACD43 taxon_order=ACD43 taxon_class=ACD43 phylum=OD1 tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
two-component DNA-binding response regulator
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_6255_11
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(8804..9526)
DNA (723bp) protein (241aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA010-E09 RepID=UPI00037A57C8
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
UDP-glucose--undecaprenyl-phosphate glucosyltransferase
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_6255_12
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(9673..10566)
DNA (894bp) protein (298aa)
UTP-glucose-1-phosphate uridylyltransferase (EC:2.7.7.9); K00963 UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
UTP-glucose-1-phosphate uridylyltransferase (GalU) n=1 Tax=uncultured bacterium RepID=K2E1W4_9BACT
Nucleotidyl transferase
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_6255_13
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

10896..12626
DNA (1731bp) protein (577aa)
alpha-glucan phosphorylase (EC:2.4.1.1); K00688 starch phosphorylase [EC:2.4.1.1] Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
alpha-glucan phosphorylase (EC:2.4.1.1)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2CPR7_9BACT
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_6255_14
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

12635..14173
DNA (1539bp) protein (513aa)
glycogen/starch synthase (EC:2.4.1.21); K00703 starch synthase [EC:2.4.1.21] Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
glycogen/starch synthase; K00703 starch synthase [EC:2.4.1.21] id=14424302 bin=bin11_novelCP species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin11_novelCP organism_group=Unknown_CP
hypothetical protein
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_6255_15
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

14177..15328
DNA (1152bp) protein (384aa)
hypothetical protein
id=1899168 Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
id=1899168 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_6255_16
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

15508..16221
DNA (714bp) protein (238aa)
hypothetical protein n=1 Tax=Hymenobacter norwichensis RepID=UPI0003B61F13
glycosyltransferase Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
hypothetical protein
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_6255_17
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

16395..16529
DNA (135bp) protein (45aa)
Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_6255_18
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

17177..17776
DNA (600bp) protein (200aa)
hypothetical protein; K02342 DNA polymerase III subunit epsilon [EC:2.7.7.7] Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
Exonuclease RNase T and DNA polymerase III id=2768922 bin=GWC2_Bacteroidetes_40_22 species=Candidatus Parvarchaeum acidiphilum genus=Candidatus Parvarchaeum taxon_order=unknown taxon_class=unknown phylum=Euryarchaeota tax=GWC2_Bacteroidetes_40_22 organism_group=Bacteroidetes
hypothetical protein
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_6255_19
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

17993..18433
DNA (441bp) protein (147aa)
Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_6255_20
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(18600..19052)
DNA (453bp) protein (151aa)
Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_6255_21
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(19057..20346)
DNA (1290bp) protein (430aa)
peptidase M23 Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
peptidase M23b id=5803516 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
peptidase M23
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_6255_22
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(20492..21841)
DNA (1350bp) protein (450aa)
gltX; glutamyl-tRNA synthetase; K01885 glutamyl-tRNA synthetase [EC:6.1.1.17] Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
glutamyl-tRNA synthetase; K01885 glutamyl-tRNA synthetase [EC:6.1.1.17] id=5803517 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
gltX; glutamyl-tRNA synthetase
Displaying 22 items

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