ggKbase home page

RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_93702

Search features with annotation key words

Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_93702_1
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

95..706
DNA (612bp) protein (204aa)
peptidase S51 dipeptidase E; K05995 dipeptidase E [EC:3.4.13.21] Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
Peptidase, S51 family n=1 Tax=Prevotella melaninogenica D18 RepID=D3I516_9BACT id=138473 bin=ACD9 species=Prevotella melaninogenica genus=Prevotella taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=ACD9 organism_group=OD1-i organism_desc=OD1-i
peptidase S51 dipeptidase E
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_93702_2
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

821..1108
DNA (288bp) protein (96aa)
hypothetical protein n=1 Tax=Candidatus Microgenomatus auricola SCGC AAA011-E14 RepID=UPI0003819BC5
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_93702_3
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

1165..1710
DNA (546bp) protein (182aa)
benzodiazepine receptor TspO Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
TspO and MBR like protein id=1912297 bin=GWE2_OD1_46_68 species=GWE2_OD1_46_68 genus=GWE2_OD1_46_68 taxon_order=GWE2_OD1_46_68 taxon_class=GWE2_OD1_46_68 phylum=OD1 tax=GWE2_OD1_46_68 organism_group=OD1 (Parcubacteria)
hypothetical protein
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_93702_4
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(2029..2508)
DNA (480bp) protein (160aa)
Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_93702_5
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

2930..3841
DNA (912bp) protein (304aa)
3-demethylubiquinone-9 3-methyltransferase n=1 Tax=Bacillus bataviensis LMG 21833 RepID=K6CHP5_9BACI
3-demethylubiquinone-9 3-methyltransferase Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
3-demethylubiquinone-9 3-methyltransferase
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_93702_6
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(3986..4774)
DNA (789bp) protein (263aa)
pyrF; orotidine 5'-phosphate decarboxylase PyrF (EC:4.1.1.23); K01591 orotidine-5'-phosphate decarboxylase [EC:4.1.1.23] Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
pyrF; orotidine 5'-phosphate decarboxylase (EC:4.1.1.23)
Orotidine 5'-phosphate decarboxylase id=1827471 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_93702_7
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(4805..5548)
DNA (744bp) protein (248aa)
PRTase-like Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
PRTase-like id=84378 bin=ACD56 species=ACD56 genus=ACD56 taxon_order=ACD56 taxon_class=ACD56 phylum=OD1-i tax=ACD56 organism_group=OD1-i organism_desc=OD1-i
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_93702_8
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

6091..6498
DNA (408bp) protein (136aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI0003766841
phnB; Protein phnB Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
phnB; Protein phnB
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_93702_9
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(6630..7550)
DNA (921bp) protein (307aa)
Peptidase cysteine/serine, trypsin-like Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
Peptidase cysteine/serine, trypsin-like id=5802987 bin=OD1_GWC2_34_28 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_93702_10
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists


7895..8140
DNA (246bp) protein (82aa)
rpmF; 50S ribosomal protein L32; K02911 large subunit ribosomal protein L32 Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
rpmF; 50S ribosomal protein L32; K02911 large subunit ribosomal protein L32 id=5803444 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
rpmF; 50S ribosomal protein L32
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_93702_11
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

8201..9124
DNA (924bp) protein (308aa)
putative transcription termination factor Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
NusB antitermination factor; K03625 N utilization substance protein B id=5803445 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
putative transcription termination factor
Displaying 11 items

View Taxonomy