ggKbase home page

RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_546

Search features with annotation key words

Displaying items 61-80 of 80 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_546_61
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

comp(60684..61445)
DNA (762bp) protein (254aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA011-J21 RepID=UPI00035D2772
cytochrome c biogenesis protein, transmembrane; K06196 cytochrome c-type biogenesis protein Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
cytochrome c biogenesis transmembrane protein
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_546_62
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

comp(61449..61901)
DNA (453bp) protein (151aa)
putative protein phosphatase Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
putative protein phosphatase id=15190349 bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
putative protein phosphatase
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_546_63
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

comp(61905..62102)
DNA (198bp) protein (66aa)
Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_546_64
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

comp(62204..63241)
DNA (1038bp) protein (346aa)
nrdF; ribonucleotide-diphosphate reductase subunit beta (EC:1.17.4.1); K00526 ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
nrdF; ribonucleotide-diphosphate reductase subunit beta (EC:1.17.4.1)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA040-L21 RepID=UPI00036AAF4B
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_546_65
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

comp(63253..63417)
DNA (165bp) protein (55aa)
Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_546_66
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

comp(63458..66274)
DNA (2817bp) protein (939aa)
nrdA; ribonucleoside-diphosphate reductase subunit alpha; K00525 ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
ribonucleoside-diphosphate reductase subunit alpha; K00525 ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] id=5090883 bin=GWC2_PER_33_13 species=PER_GWC2_33_13 genus=PER_GWC2_33_13 taxon_order=PER_GWC2_33_13 taxon_class=PER_GWC2_33_13 phylum=PER tax=GWC2_PER_33_13 organism_group=PER (Peregrinibacteria) organism_desc=No RuBisCO in this genome
nrdA; ribonucleoside-diphosphate reductase subunit alpha
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_546_67
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

66781..68055
DNA (1275bp) protein (425aa)
seryl-tRNA synthetase (EC:6.1.1.11); K01875 seryl-tRNA synthetase [EC:6.1.1.11] Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
serS; seryl-tRNA synthetase; K01875 seryl-tRNA synthetase [EC:6.1.1.11] id=5803449 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
seryl-tRNA synthetase (EC:6.1.1.11)
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_546_68
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

68074..68994
DNA (921bp) protein (307aa)
id=3012706 Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
id=3012706 bin=GWC1_OD1_38_17 species=ACD11 genus=ACD11 taxon_order=ACD11 taxon_class=ACD11 phylum=OD1-i tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_546_69
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

comp(69226..71079)
DNA (1854bp) protein (618aa)
hypothetical protein Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
Tetratricopeptide repeat protein id=3012775 bin=GWC1_OD1_38_17 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
hypothetical protein
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_546_70
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

comp(71083..72720)
DNA (1638bp) protein (546aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA010-E09 RepID=UPI00036E7BB8
glycosyl transferase GT39 family protein Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
glycosyl transferase
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_546_71
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

72739..73170
DNA (432bp) protein (144aa)
id=2192937 Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
id=2192937 bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_546_72
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

73215..75668
DNA (2454bp) protein (818aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2FYB3_9BACT
hypothetical protein Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
hypothetical protein
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_546_73
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

75677..76231
DNA (555bp) protein (185aa)
Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_546_74
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

76197..76877
DNA (681bp) protein (227aa)
hypothetical protein Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
Membrane protein, GtrA superfamily id=3012784 bin=GWC1_OD1_38_17 species=ACD81 genus=ACD81 taxon_order=ACD81 taxon_class=ACD81 phylum=OD1 tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
membrane protein, GtrA superfamily
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_546_75
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

76924..78045
DNA (1122bp) protein (374aa)
DNA polymerase III subunits gamma and tau; K02343 DNA polymerase III subunit gamma/tau [EC:2.7.7.7] Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA010-E09 RepID=UPI0003723978
DNA polymerase III subunits gamma and tau
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_546_76
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

comp(78403..79692)
DNA (1290bp) protein (430aa)
Recombinase n=1 Tax=Hippea maritima (strain ATCC 700847 / DSM 10411 / MH2) RepID=F2LVL3_HIPMA
recombinase Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
recombinase
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_546_77
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

comp(79689..80303)
DNA (615bp) protein (205aa)
id=1955616 Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
id=1955616 bin=GWE2_Bacteroidetes_41_25 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_Bacteroidetes_41_25 organism_group=Bacteroidetes organism_desc=Good
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_546_78
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

80321..80533
DNA (213bp) protein (71aa)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI00037089BB
helix-turn-helix domain-containing protein Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
helix-turn-helix domain-containing protein
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_546_79
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

80535..81287
DNA (753bp) protein (251aa)
DNA methylase N-4/N-6 domain-containing protein Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
DNA methylase N-4/N-6 domain protein id=2923035 bin=GWC1_KAZAN_52_13 species=GWC1_KAZAN_52_13 genus=GWC1_KAZAN_52_13 taxon_order=GWC1_KAZAN_52_13 taxon_class=GWC1_KAZAN_52_13 phylum=KAZAN tax=GWC1_KAZAN_52_13 organism_group=Kazan
DNA methylase N-4/N-6 domain-containing protein
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_546_80
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

81292..81975
DNA (684bp) protein (228aa)
hypothetical protein Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
Putative uncharacterized protein id=2923030 bin=GWC1_KAZAN_52_13 species=GWC1_KAZAN_52_13 genus=GWC1_KAZAN_52_13 taxon_order=GWC1_KAZAN_52_13 taxon_class=GWC1_KAZAN_52_13 phylum=KAZAN tax=GWC1_KAZAN_52_13 organism_group=Kazan
hypothetical protein
Displaying items 61-80 of 80 in total

View Taxonomy