ggKbase home page

RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_14855_11

Organism: Candidatus Ryanbacteria bacterium RIFCSPLOWO2_01_FULL_44_230

near complete RP 44 / 55 MC: 1 BSCG 47 / 51 ASCG 10 / 38
Location: comp(9933..10682)

Top 3 Functional Annotations

Value Algorithm Source
transcriptional regulator TrmB Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 249.0
  • Bit_score: 489
  • Evalue 3.20e-135
transcriptional regulator, TrmB id=66848 bin=ACD48 species=ACD48 genus=ACD48 taxon_order=ACD48 taxon_class=ACD48 phylum=OP11 tax=ACD48 organism_group=OP11 (Microgenomates) organism_desc=OP11 similarity UNIREF
DB: UNIREF100
  • Identity: 50.0
  • Coverage: 244.0
  • Bit_score: 249
  • Evalue 3.00e-63
iclR helix-turn-helix domain protein similarity KEGG
DB: KEGG
  • Identity: 29.0
  • Coverage: 241.0
  • Bit_score: 102
  • Evalue 1.70e-19

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_RIF_OD1_12_44_230 → RIF-OD1-12 → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 750
ATGGAGTTAGGACAAGAACTCAAAAAGGCAGGGCTTAATAGTTCTGAAATAACTGTTTACCTCTTTCTTCTTACAAAAGGCTTCACCTCGCCGCCAGAGATTGCTCGAGGCACGGGTATCGCCCGGACCAACTGCTACAATGTTCTCAAAAGTCTAGAGGGCAAAAATCTTGTTGAGCGGCAAATACAGGGCAAACGACATGTCTATCTGTCTACAGATCCGCAAGCGTTAGTGGGAATACTTGAACGACGGGCGCGAGCTCTTTCTTCGGCGCTACCCGATTTGCGGGCACTCCACAAAGTGTCAAAAAATAAGCCAAGTATTCGATTTTTTGACGGCTTCGAGCAGCTTAAGGAACTCTACTATACAACCGCCTCCGCAGATGAAATAGTGGCTATTGGCTCAACAAAAAAGCTTGCTGAAGCATCCACTGATTTTTTTGAGGAATATCAAAAGAAACTAAAGAAAAACAGCGTTGTCTTTCGGGATATTTTAAGTTATGTTTCAAAAGACGCTATCCCTATTACGCGCGGGATTTTGGGGGGGCTCTATGAATATAGATTACTCCCGGAAGCACGTGGAGAAATCCCAACAGATATCCTTATCTGGGACGACAATGTCGCGCTCATCAGTCTTGACCAGCCGATATTTGGAACTATGATCACTAGTCCTTCGCTTGCACTCACATTCCGCGTGGTCTTTAACATTATATGGAACGCGCTTCCCCAAAACCATTCGGGAAATCTTTAG
PROTEIN sequence
Length: 250
MELGQELKKAGLNSSEITVYLFLLTKGFTSPPEIARGTGIARTNCYNVLKSLEGKNLVERQIQGKRHVYLSTDPQALVGILERRARALSSALPDLRALHKVSKNKPSIRFFDGFEQLKELYYTTASADEIVAIGSTKKLAEASTDFFEEYQKKLKKNSVVFRDILSYVSKDAIPITRGILGGLYEYRLLPEARGEIPTDILIWDDNVALISLDQPIFGTMITSPSLALTFRVVFNIIWNALPQNHSGNL*