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RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_395_11

Organism: Candidatus Ryanbacteria bacterium RIFCSPLOWO2_01_FULL_44_230

near complete RP 44 / 55 MC: 1 BSCG 47 / 51 ASCG 10 / 38
Location: comp(11128..12363)

Top 3 Functional Annotations

Value Algorithm Source
RpoD subfamily RNA polymerase sigma-70 subunit; K03086 RNA polymerase primary sigma factor Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 411.0
  • Bit_score: 802
  • Evalue 2.10e-229
RNA polymerase sigma factor id=2669954 bin=GWA1_ZB2_49_26 species=ACD15 genus=ACD15 taxon_order=ACD15 taxon_class=ACD15 phylum=OD1-i tax=GWA1_ZB2_49_26 organism_group=ZB2 organism_desc=Good similarity UNIREF
DB: UNIREF100
  • Identity: 59.9
  • Coverage: 414.0
  • Bit_score: 477
  • Evalue 1.10e-131
RpoD subfamily RNA polymerase sigma-70 subunit similarity KEGG
DB: KEGG
  • Identity: 56.0
  • Coverage: 375.0
  • Bit_score: 397
  • Evalue 4.10e-108

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Taxonomy

R_RIF_OD1_12_44_230 → RIF-OD1-12 → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 1236
ATGAGAAAAGGAAAAAGCGCGATAAAAACAAGAAAGAAAACAGGTGCTCCAAAAAAGAAAACAAGACAGGAGGATATGCCCACGGGTCGTGTCGATAAGAAAAAAGAGCAGAAGAAAAAAAGAAACAGCCGAAAACAGGAGGAATTTGAGAAAAAGTTCGCAATCTTGGAAAAAAAAGGTAAAGAGCGTGGTGCTGTTACCTATGCTGAAATTTTAAATCTCTTTCCCCATATTGAGGACGACATTTTCCGGTTAGAGGAGTTGTATGCGCGTCTTTCGGATCTCCATATTGATGTGCTGGAAGTAAAAAACCTTATTGAGTTGGAGAAGGAAAAAAAGGAAAAAAGCCCGTCAAAGAGGGAAGGAATAATGAAGAAAAAATTTGAAGAGATGCTCACCGGCACGGAACATTATGACTCGGTGCAGATGTACTTAAAGGAGATAGGACGCATCCCGCTTCTTACTGCCGAAGGAGAGCGGGAGCTTGCAAAGCGGATAGAAAAAGGAGACATTGAGTCCAGAAAACGCTTAGCACAGGCAAACTTGCGGCTTGTTGTTTCAATCGCGAAAAAATATGTGGGGAGAAGTCATAATCTTTCACTGCTTGATCTTGTTCAAGAAGGAAATATCGGGCTTTTTCGCGCGGTTGAGAAATTCGACTGGAGGCGCGGATTTAAATTTTCAACGTATGCGACGTGGTGGATCCGGCAGGCAATTACCAGAGCGATTGCGGATCAGGCGCGCACTATCCGAATACCGGTGCATATGGTGGAAACTATTTCAAAATTCCATCAGATGCGGCGACGCCTCACACAAGACTTGGGACGCGAGCCGCTCCCGGAAGAGATTGCAGCGGAGATGGGAATGGAGCCGGAGAAGATACATCATATTATGAAGATTTCTCAAGAAACCATTTCTCTTGAAATGCCGGTCGGAGAAGATGAAGAAGATTCCACCTTAAGTGAATTTATTGAAGATGAAAAAGTACTCTCGCCGGCTGACCAGACGTCGCGAGAATTGCTTAAAGACCAGATACGGGCGATCATTGAAGATCTTCTTCCGCGAGAGCAGAAAATTTTGCGCATGCGGTTTGGTCTTGATGACAGCATTACACATACGCTTGAGGAGGTGGGGAGAGAGTTTGGAGTGACGCGTGAACGCATCCGTCAGATTGAAGCGAAAGCAATTGAAAAAATCCGTCAGCACAGAAAGTCGGACAGACTAACAGGATATTAA
PROTEIN sequence
Length: 412
MRKGKSAIKTRKKTGAPKKKTRQEDMPTGRVDKKKEQKKKRNSRKQEEFEKKFAILEKKGKERGAVTYAEILNLFPHIEDDIFRLEELYARLSDLHIDVLEVKNLIELEKEKKEKSPSKREGIMKKKFEEMLTGTEHYDSVQMYLKEIGRIPLLTAEGERELAKRIEKGDIESRKRLAQANLRLVVSIAKKYVGRSHNLSLLDLVQEGNIGLFRAVEKFDWRRGFKFSTYATWWIRQAITRAIADQARTIRIPVHMVETISKFHQMRRRLTQDLGREPLPEEIAAEMGMEPEKIHHIMKISQETISLEMPVGEDEEDSTLSEFIEDEKVLSPADQTSRELLKDQIRAIIEDLLPREQKILRMRFGLDDSITHTLEEVGREFGVTRERIRQIEAKAIEKIRQHRKSDRLTGY*