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RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_591_32

Organism: Candidatus Giovannonibacteria bacterium RIFCSPLOWO2_01_FULL_45_140

near complete RP 43 / 55 BSCG 47 / 51 ASCG 10 / 38
Location: 25118..25333

Top 3 Functional Annotations

Value Algorithm Source
Protein containing Helix-turn-helix type 3 domain protein {ECO:0000313|EMBL:KKT60090.1}; TaxID=1618645 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_G similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 71.0
  • Bit_score: 141
  • Evalue 3.50e-31
Helix-turn-helix id=4731860 bin=GWC2_OD1_43_27 species=Nostoc sp. genus=Nostoc taxon_order=Nostocales taxon_class=unknown phylum=Cyanobacteria tax=GWC2_OD1_43_27 organism_group=OD1 (Parcubacteria) organism_desc=Same as C1_43_61 and D1_43_18 Curated this version (complete) similarity UNIREF
DB: UNIREF100
  • Identity: 80.6
  • Coverage: 72.0
  • Bit_score: 118
  • Evalue 3.00e-24
putative transcription factor, MBF1 like protein similarity KEGG
DB: KEGG
  • Identity: 73.4
  • Coverage: 64.0
  • Bit_score: 92
  • Evalue 3.80e-17

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Taxonomy

GWA1_OD1_44_25 → Giovannonibacteria → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 216
ATGAAACGTGAAATTTTAAATAAATTTGGTAATAAAGTCCGCGAGGAGCGGGCTAAATTAGGTTTATCACAGGAAGAATTGGCCGTACGCGCTGGAGTTCACCGAACTTATATAGGCATGATAGAACGAGCAGAAAAGAACATAACGCTTGAGAATATTCAGAAAATCTGTAAAGCACTGAACTTAAAAATTGGAGAATTTTTTGTTGATTTCTAA
PROTEIN sequence
Length: 72
MKREILNKFGNKVREERAKLGLSQEELAVRAGVHRTYIGMIERAEKNITLENIQKICKALNLKIGEFFVDF*