ggKbase home page

RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_591_50

Organism: Candidatus Giovannonibacteria bacterium RIFCSPLOWO2_01_FULL_45_140

near complete RP 43 / 55 BSCG 47 / 51 ASCG 10 / 38
Location: comp(39253..40488)

Top 3 Functional Annotations

Value Algorithm Source
pilus assembly protein PilC; K02653 type IV pilus assembly protein PilC Tax=RIFCSPLOWO2_01_FULL_OD1_Giovannonibacteria_45_140_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 411.0
  • Bit_score: 788
  • Evalue 5.40e-225
Type II secretion system F domain id=2824644 bin=GWC1_OD1_38_17 species=ACD11 genus=ACD11 taxon_order=ACD11 taxon_class=ACD11 phylum=OD1-i tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation similarity UNIREF
DB: UNIREF100
  • Identity: 41.1
  • Coverage: 414.0
  • Bit_score: 348
  • Evalue 1.00e-92
pilus assembly protein PilC similarity KEGG
DB: KEGG
  • Identity: 37.6
  • Coverage: 412.0
  • Bit_score: 276
  • Evalue 1.10e-71

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_OD1_Giovannonibacteria_45_140 → Giovannonibacteria → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 1236
ATGCCTCTGTATCACTATAAGGCCAGAGATAAGAGCGGAAATGACATGGACGGCAACCGCGAGGCGAAAGACAAGTATGATCTTGCGCGCGCGTTGCGTGCGGAAGGGGTGCTGCCGATTTTTATCTCGGAAACCGGCGCGGACAAGTCTGTCGGCTGGCGGAGCAAAAAAATAAACGACTATATTCCATCGTTTCTTAAAAGAGTTTCTCTTGAAGAAAAACTGAATTTTACGCGCAACATCGCGGTTATGATAGGGGCAGGCGTGAGCCTGTCAAAGGCGCTGGAAGTGATGGCAAGGCAGACCCAAAATGACAAATTTAAAACCGTAATTCTGGCAATAACAGATGCAATCAAAAATGGCCGAAGTTTTGCAGACGCCATAGGGGAGCATAAAACCGTTTTCCCAAAATTTTACCAGGAGATGGTTCGTGCCGGAGAAAAATCCGGCAAATTGGAAGAATCATTAAAACTAATAGCGCTGCAATTGAAAAAAGACTATGCACTTAGGAGAAAGGTGCGCGGAGCCATGGTTTATCCCGTAATCGTTATGATCGCCATGGTCGGCATAGGAATTTTGATGTTGATTTACGTCGTTCCGACGCTTATTACCACCTTTGAAGAATTAAAAGTACAGCTTCCGCTTTCAACCAGATTGATTATTTTTGTAAGCCAATCAATTCTCCAAAGCGGGCTGATTTTGCTTGCAGGAGCAGCGGTTGCAGGCTACGGAGCATATCGCTGGGCAAAATCAAAAATGGGAAAAACGCAGCTTGATTGGCTGTTTACGCACCTGCCTGTCATAAAAGGAATTAATCAAAAATTCAACTCCGCCCGGACCTGCAGGACTTTAAGCTCGCTGATATCTTCGGGGGTTGATATTTTGGAAGCGATTTCTATCACAAAAGAAGTTTTGCAAAACCATCTTTATCAAAATATTTTGGACGATGCGCGCGCAAAAATTCAGCGAGGCGAAACGATTTCCAAGGCATTCCTTTCATCCGGAGAGCTTTATCCGTCGCTTGTTGGCGAAATGATAGGGATCGGCGAGGAAACCGGCGAACTTTCGCAAATGCTTCTGCGCCTCGCTTCTTTTTACGAAAGCGAAGTGTCGCAGGCGACCAAGGATCTTTCAACGGTTATTGAGCCGGCGCTAATGATTCTTATGGGGGTTGTAGTGGGATTTTTCGCCGTTTCCATGATCTCGCCAATGTATAATTTAGTCGGCGCATTTTAA
PROTEIN sequence
Length: 412
MPLYHYKARDKSGNDMDGNREAKDKYDLARALRAEGVLPIFISETGADKSVGWRSKKINDYIPSFLKRVSLEEKLNFTRNIAVMIGAGVSLSKALEVMARQTQNDKFKTVILAITDAIKNGRSFADAIGEHKTVFPKFYQEMVRAGEKSGKLEESLKLIALQLKKDYALRRKVRGAMVYPVIVMIAMVGIGILMLIYVVPTLITTFEELKVQLPLSTRLIIFVSQSILQSGLILLAGAAVAGYGAYRWAKSKMGKTQLDWLFTHLPVIKGINQKFNSARTCRTLSSLISSGVDILEAISITKEVLQNHLYQNILDDARAKIQRGETISKAFLSSGELYPSLVGEMIGIGEETGELSQMLLRLASFYESEVSQATKDLSTVIEPALMILMGVVVGFFAVSMISPMYNLVGAF*