ggKbase home page

RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_591_95

Organism: Candidatus Giovannonibacteria bacterium RIFCSPLOWO2_01_FULL_45_140

near complete RP 43 / 55 BSCG 47 / 51 ASCG 10 / 38
Location: comp(77852..78304)

Top 3 Functional Annotations

Value Algorithm Source
Ribonuclease H {ECO:0000313|EMBL:KKT60148.1}; TaxID=1618645 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWA1_44_25.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 150.0
  • Bit_score: 301
  • Evalue 7.30e-79
Ribonuclease H id=3345199 bin=GWC1_OD1_38_17 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation similarity UNIREF
DB: UNIREF100
  • Identity: 65.5
  • Coverage: 142.0
  • Bit_score: 196
  • Evalue 2.40e-47
ribonuclease HI similarity KEGG
DB: KEGG
  • Identity: 43.5
  • Coverage: 138.0
  • Bit_score: 121
  • Evalue 2.10e-25

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

GWA1_OD1_44_25 → Giovannonibacteria → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 453
ATGTCTAAAGAAAAATTAGAAAAATTAATTGTCTATACGGACGGGGGATCTCGTGGAAATCCGGGGCCGGCGGGGATCGGGGTGGTTATTTGCGATGCGGGAGAGCGGATGATTAAAGAATACGGAGAGAAGATCGGCACAAAAACAAACAATGAAGCTGAATACGAAGCGGTGATTTTTGCGCTAAAAAAGATAAAAGCGCTTTTCGGAAAAGAAAAAACAAAAAAAATGGAGGTGGAAATGCGGATGGATTCGGAGTTTGTCGCCAGCCAGCTTAATGGAAAATACAAAATTGAGGAAGAAAGAATGTTCCCGCTTTTTATTGCGGTATGGAATCTTAAGATGGATTTTGCTAAGGTAACGTTCAGCCATGTTCGGAGAGAGAACAATCGCGCCGCTGACAGATTGGTGAACGCCGCGCTGGACTCCGACCAAGGCCGGCTGTGGCAATAA
PROTEIN sequence
Length: 151
MSKEKLEKLIVYTDGGSRGNPGPAGIGVVICDAGERMIKEYGEKIGTKTNNEAEYEAVIFALKKIKALFGKEKTKKMEVEMRMDSEFVASQLNGKYKIEEERMFPLFIAVWNLKMDFAKVTFSHVRRENNRAADRLVNAALDSDQGRLWQ*