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RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_14424_9

Organism: Candidatus Giovannonibacteria bacterium RIFCSPLOWO2_01_FULL_45_140

near complete RP 43 / 55 BSCG 47 / 51 ASCG 10 / 38
Location: comp(4081..4368)

Top 3 Functional Annotations

Value Algorithm Source
histone family protein DNA-binding protein; K03530 DNA-binding protein HU-beta Tax=RIFCSPLOWO2_01_FULL_OD1_Giovannonibacteria_45_140_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 95.0
  • Bit_score: 187
  • Evalue 7.50e-45
DNA-binding protein HupA id=3506549 bin=GWC1_OD1_38_17 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation similarity UNIREF
DB: UNIREF100
  • Identity: 59.8
  • Coverage: 97.0
  • Bit_score: 109
  • Evalue 1.40e-21
histone-like DNA-binding protein similarity KEGG
DB: KEGG
  • Identity: 51.6
  • Coverage: 95.0
  • Bit_score: 99
  • Evalue 7.00e-19

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Taxonomy

R_OD1_Giovannonibacteria_45_140 → Giovannonibacteria → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 288
ATGAACAAGTCACAATTAGCAGAACAGGTTTACGAAATGCACACCAAAAAGGGTGTGGACGTTTCAAAAAAGCACGCCGACGAGGTCGTTGATTTTGTCTTTGACACTATCACCGGCGCTCTTAAAAAGGGCGAGGAAGTCTCAATCTCCGGTTTCGGCGTTTTTTTGGTGAAATCCAGAAAGGCCCGCACCGCGCGCAACCCTCGCACCGGCGAGATGGTCCAAGTTCCAGCCACGACCGTACCGCGCTTTCGCGCAGGAAAAGCTCTGAAAGAAGCAGTGAAATAA
PROTEIN sequence
Length: 96
MNKSQLAEQVYEMHTKKGVDVSKKHADEVVDFVFDTITGALKKGEEVSISGFGVFLVKSRKARTARNPRTGEMVQVPATTVPRFRAGKALKEAVK*