ggKbase home page

RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_818_32

Organism: Candidatus Giovannonibacteria bacterium RIFCSPLOWO2_01_FULL_45_140

near complete RP 43 / 55 BSCG 47 / 51 ASCG 10 / 38
Location: 26118..27743

Top 3 Functional Annotations

Value Algorithm Source
bpo:BP951000_0805 polyA polymerase family protein; K00970 poly(A) polymerase [EC:2.7.7.19] id=3345208 bin=GWC1_OD1_38_17 species=ACD81 genus=ACD81 taxon_order=ACD81 taxon_class=ACD81 phylum=OD1 tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation similarity UNIREF
DB: UNIREF100
  • Identity: 50.0
  • Coverage: 524.0
  • Bit_score: 533
  • Evalue 2.30e-148
PolyA polymerase {ECO:0000313|EMBL:KKT56982.1}; TaxID=1618652 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_44_23.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 541.0
  • Bit_score: 1070
  • Evalue 0.0
polyA polymerase similarity KEGG
DB: KEGG
  • Identity: 39.8
  • Coverage: 498.0
  • Bit_score: 329
  • Evalue 1.80e-87

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_44_23 → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 1626
ATGGCTTCGGACCATGTGTTCCCCGTTCAAATCGGGGCGAGGGCGCAAATACAAATGGAAAATATTATGGCCAAAGAAAATAACGAGAAAAAATTTACTATCCCCAAAGAAGTTCGCGCGGCGGTGGCGATTTTGGAAAGCGCCGGTTTTGAGGCGTATCTTATCGGCGGGTGCGTCCGGGACCTTTTAATTGAGAGGACGCCTCAAGATTGGGACATAACCACCAATGCTAGGCCGGAGAAAATCCAAGAGCTTTTTCCAAAAAGTTTTTATGAAAACAAATTTGGAACGGTAAGCGTGGTTACAGATTCGGAAAATCCGAGGCTCCGCACTATAGAAATCACTCCTTACCGGCTTGAAGGAAAATATTCCGACAAGCGCCATCCGGATGAAGTGAAATTCGCTGATAAACTAGAAGACGACTTGGCAAGAAGGGATTTTACGATAAACGCAATGGCGATGAAGCTCGCGCTCTCCTCGAAGTCGCTCGGGAAGAAGTCCGACTTCTTTGGGATCTCGAAGTCGGACTTCGGGGAGAGCGACTTCTTCCCGGGCTCGAGCTTGATCGATCCTTTCAACGGCCAAAAAGACTTAGAGCAAAAACTCATTCGCGCCGTCGGCGATCCCAACGAGCGTTTTGAAGAAGACGCGCTCCGGATTATGCGCGCAGTACGGCTGTCGGCAGAACTAGGATTTACAATTGAGGAAAAAACCCAAAAAGCGTTAAAAGACCGTGCTCATCTGCTCCGTGTTATTGCAAAAGAGAGAATCCGCGACGAATTTTCCAAAACACTGATGGCCGCCACACCTTCACTAGGACTTGAAACCATGCGGAAGCTGGGTGTTTTAAAACTATTTTTGCCGGAACTGGAAGAGGGGTGGGGTGTCGGACAAAATAAACACCATGTCTATACCGTCTGGGAGCACAATGTCAGATCTTTGGATTGCGCCGCAAAAGAAAAATGGCCGCTCGTAGTTCGCCTCGCCGCGCTTTTTCACGATATTGGGAAACCCCGAAGCAAACGCGGCGACGGGCCAGACTCCACTTTTTACGGGCATGAAATAATCGGCGCAAAGATGTCCGCGCAAGCTCTTTCACGCCTTCGCTTCTCCGCAGAGTTTACGGAGAAAGCAGCCAAACTGGTCCGCTACCACCTTTTTTATTACAATGTAGATGAAGTGTCGGAATCTTCCGTGCGCCGTCTTATCTCGCGCGTCGGGCCGGAAGATATGGAAGATTTAATCCGCGTCCGCATCTGCGATCGCATCGGTTCCGGAGTTCCAAAAGCGGAGCCGTACAAACTCCGCCATTTTAGATTTTTGGTTGAAAAATTGCAAAGAGATCCGGTTTCGGTTAAAATGCTTAAAATAAACGGCGATAAAATAAAGGAGCTCACCGGGCTTCCGCAAAGCATAAAAATCGGGTTGATTATTCATGCTTTGATGGACGAAGTTTTGGACGATCCGGAAAAAAATACACCGGAATATTTAGAAAAACGCGCCACGGAACTGAACGCTTTGCCGGATGCAGAGCTCAAAAAACTCGCCGACGCCGGCCGCAGCAAAAAATTAGGCCTTGAAGAAGAAGAGATTTCAAAAATTAAGAAAAAACACTGGGTAAAATAA
PROTEIN sequence
Length: 542
MASDHVFPVQIGARAQIQMENIMAKENNEKKFTIPKEVRAAVAILESAGFEAYLIGGCVRDLLIERTPQDWDITTNARPEKIQELFPKSFYENKFGTVSVVTDSENPRLRTIEITPYRLEGKYSDKRHPDEVKFADKLEDDLARRDFTINAMAMKLALSSKSLGKKSDFFGISKSDFGESDFFPGSSLIDPFNGQKDLEQKLIRAVGDPNERFEEDALRIMRAVRLSAELGFTIEEKTQKALKDRAHLLRVIAKERIRDEFSKTLMAATPSLGLETMRKLGVLKLFLPELEEGWGVGQNKHHVYTVWEHNVRSLDCAAKEKWPLVVRLAALFHDIGKPRSKRGDGPDSTFYGHEIIGAKMSAQALSRLRFSAEFTEKAAKLVRYHLFYYNVDEVSESSVRRLISRVGPEDMEDLIRVRICDRIGSGVPKAEPYKLRHFRFLVEKLQRDPVSVKMLKINGDKIKELTGLPQSIKIGLIIHALMDEVLDDPEKNTPEYLEKRATELNALPDAELKKLADAGRSKKLGLEEEEISKIKKKHWVK*