ggKbase home page

RIFCSPLOWO2_01_FULL_OD1_50_130_rifcsplowo2_01_scaffold_26746_9

Organism: Candidatus Taylorbacteria bacterium RIFCSPLOWO2_01_FULL_50_130

partial RP 40 / 55 MC: 1 BSCG 40 / 51 ASCG 12 / 38 MC: 1
Location: comp(5833..6366)

Top 3 Functional Annotations

Value Algorithm Source
rplF; 50S ribosomal protein L6; K02933 large subunit ribosomal protein L6 Tax=RIFCSPLOWO2_02_RIF_OD1_11_50_13_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 177.0
  • Bit_score: 344
  • Evalue 1.20e-91
50S ribosomal protein L6; K02933 large subunit ribosomal protein L6 id=5803327 bin=OD1_GWC2_34_28 species=sediment metagenome genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome similarity UNIREF
DB: UNIREF100
  • Identity: 50.6
  • Coverage: 178.0
  • Bit_score: 182
  • Evalue 4.20e-43
rplF; 50S ribosomal protein L6 similarity KEGG
DB: KEGG
  • Identity: 44.9
  • Coverage: 176.0
  • Bit_score: 161
  • Evalue 1.60e-37

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_RIF_OD1_11_50_13 → RIF-OD1-11 → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 534
ATGTCACGCTTAGCGAAAAAACCCATCATCATTCCTGAAAGAGTGACCGCGACCATACGTGGAAACTCCATAACCGTGCAGGGACCTCTCGGCACTCTCACGCGCTCTTTTTCGCCGATGGTAAAAGTGGAGCAGGAGAAAGACGCCATTTCCGTCTCTCCGCGCGGCAATGCGCCTGCTGCGAATATGCATGCGGGGACGACCGTGGCGCATGTGCAGAATATGATACGCGGAAGTCAGAAGGCCTTTACTAAGAGACTCATCATAGAGGGTATTGGATTTAAGGCCGACGTTAAGGACAGAGAAATGACGCTGTCTCTCGGGTTTTCCCATCCGGTGAAACTCGCCGTTCCCGAGAATGTATTGGTAACTGCCGAAAAGAGCGTCATCACCGTACACAGCTCGGATATTGAAGCGGTCGGCGCATTTGCCGCGAGGGTACGGGCGCTCAAAAAACCGGAGCCGTATAAAGGGAAAGGGATACGCTATGAAAATGAAGTGGTGCGCAGAAAGCAGGGAAAGAAAACCACCTAA
PROTEIN sequence
Length: 178
MSRLAKKPIIIPERVTATIRGNSITVQGPLGTLTRSFSPMVKVEQEKDAISVSPRGNAPAANMHAGTTVAHVQNMIRGSQKAFTKRLIIEGIGFKADVKDREMTLSLGFSHPVKLAVPENVLVTAEKSVITVHSSDIEAVGAFAARVRALKKPEPYKGKGIRYENEVVRRKQGKKTT*