ggKbase home page

RIFOXYA2_FULL_OD1_47_19_rifoxya2_full_scaffold_50

Search features with annotation key words

Displaying items 31-60 of 249 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFOXYA2_FULL_OD1_47_19_rifoxya2_full_scaffold_50_31
RIFOXYA2_FULL_OD1_Falkowbacteria_47_19_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

comp(30163..31020)
DNA (858bp) protein (286aa)
PHP domain-containing protein; K07053 Tax=RIFOXYA2_FULL_OD1_Falkowbacteria_47_19_curated
Putative metal-dependent phosphoesterase, PHP family id=1899165 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
PHP domain-containing protein
RIFOXYA2_FULL_OD1_47_19_rifoxya2_full_scaffold_50_32
RIFOXYA2_FULL_OD1_Falkowbacteria_47_19_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

comp(31032..32096)
DNA (1065bp) protein (355aa)
id=1899167 Tax=RIFOXYA2_FULL_OD1_Falkowbacteria_47_19_curated
id=1899167 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
RIFOXYA2_FULL_OD1_47_19_rifoxya2_full_scaffold_50_33
RIFOXYA2_FULL_OD1_Falkowbacteria_47_19_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

comp(32144..33349)
DNA (1206bp) protein (402aa)
hypothetical protein
id=1899168 Tax=RIFOXYA2_FULL_OD1_Falkowbacteria_47_19_curated
id=1899168 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
RIFOXYA2_FULL_OD1_47_19_rifoxya2_full_scaffold_50_34
RIFOXYA2_FULL_OD1_Falkowbacteria_47_19_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

comp(33392..34879)
DNA (1488bp) protein (496aa)
glgA; glycogen synthase GlgA (EC:2.4.1.21) Tax=RIFOXYA2_FULL_OD1_Falkowbacteria_47_19_curated
glgA; glycogen/starch synthase, ADP-glucose type family protein (EC:2.4.1.21)
Glycogen synthase id=1899170 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
RIFOXYA2_FULL_OD1_47_19_rifoxya2_full_scaffold_50_35
RIFOXYA2_FULL_OD1_Falkowbacteria_47_19_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

comp(34903..35427)
DNA (525bp) protein (175aa)
crossover junction endodeoxyribonuclease RuvC (EC:3.1.22.4); K01159 crossover junction endodeoxyribonuclease RuvC [EC:3.1.22.4] Tax=RIFOXYA2_FULL_OD1_Falkowbacteria_47_19_curated
crossover junction endodeoxyribonuclease RuvC (EC:3.1.22.4)
Crossover junction endodeoxyribonuclease RuvC id=1899172 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
RIFOXYA2_FULL_OD1_47_19_rifoxya2_full_scaffold_50_36
RIFOXYA2_FULL_OD1_Falkowbacteria_47_19_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

comp(35624..36349)
DNA (726bp) protein (242aa)
hypothetical protein Tax=RIFOXYA2_FULL_OD1_Falkowbacteria_47_19_curated
Probable transcriptional regulatory protein Theam_1111 id=1899174 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
hypothetical protein
RIFOXYA2_FULL_OD1_47_19_rifoxya2_full_scaffold_50_37
RIFOXYA2_FULL_OD1_Falkowbacteria_47_19_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

36585..37046
DNA (462bp) protein (154aa)
tmRNA-binding protein SmpB Tax=RIFOXYA2_FULL_OD1_Falkowbacteria_47_19_curated
SsrA-binding protein id=1981229 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
smpB; SsrA-binding protein
RIFOXYA2_FULL_OD1_47_19_rifoxya2_full_scaffold_50_38
RIFOXYA2_FULL_OD1_Falkowbacteria_47_19_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

comp(38192..40015)
DNA (1824bp) protein (608aa)
beta-N-acetylhexosaminidase (EC:3.2.1.52) Tax=RIFOXYA2_FULL_OD1_Falkowbacteria_47_19_curated
beta-N-acetylhexosaminidase (EC:3.2.1.52)
Beta-N-acetylhexosaminidase n=1 Tax=Halothermothrix orenii (strain H 168 / OCM 544 / DSM 9562) RepID=B8D1U9_HALOH
RIFOXYA2_FULL_OD1_47_19_rifoxya2_full_scaffold_50_39
RIFOXYA2_FULL_OD1_Falkowbacteria_47_19_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

40129..41010
DNA (882bp) protein (294aa)
Uncharacterized protein n=1 Tax=Methanobacterium formicicum DSM 3637 RepID=K2QCK7_METFO
hypothetical protein; K08977 putative membrane protein Tax=RIFOXYA2_FULL_OD1_Falkowbacteria_47_19_curated
hypothetical protein
RIFOXYA2_FULL_OD1_47_19_rifoxya2_full_scaffold_50_40
RIFOXYA2_FULL_OD1_Falkowbacteria_47_19_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

41046..41798
DNA (753bp) protein (251aa)
transcriptional regulator TrmB Tax=RIFOXYA2_FULL_OD1_Falkowbacteria_47_19_curated
Transcriptional regulator, TrmB id=1955928 bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
transcriptional regulator TrmB
RIFOXYA2_FULL_OD1_47_19_rifoxya2_full_scaffold_50_41
RIFOXYA2_FULL_OD1_Falkowbacteria_47_19_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

comp(41845..42432)
DNA (588bp) protein (196aa)
Uncharacterized protein n=1 Tax=Microcystis sp. T1-4 RepID=I4IBF6_9CHRO
Uncharacterized protein Tax=RIFOXYA2_FULL_OD1_Falkowbacteria_47_19_curated
RIFOXYA2_FULL_OD1_47_19_rifoxya2_full_scaffold_50_42
RIFOXYA2_FULL_OD1_Falkowbacteria_47_19_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

43380..43577
DNA (198bp) protein (66aa)
Tax=RIFOXYA2_FULL_OD1_Falkowbacteria_47_19_curated
RIFOXYA2_FULL_OD1_47_19_rifoxya2_full_scaffold_50_43
RIFOXYA2_FULL_OD1_Falkowbacteria_47_19_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

43734..44069
DNA (336bp) protein (112aa)
Uncharacterized protein n=1 Tax=Geobacter bemidjiensis (strain Bem / ATCC BAA-1014 / DSM 16622) RepID=B5EDL1_GEOBB
membrane protein; K08972 putative membrane protein Tax=RIFOXYA2_FULL_OD1_Falkowbacteria_47_19_curated
membrane protein
RIFOXYA2_FULL_OD1_47_19_rifoxya2_full_scaffold_50_44
RIFOXYA2_FULL_OD1_Falkowbacteria_47_19_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

44075..44422
DNA (348bp) protein (116aa)
hypothetical protein n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI00036867F5
hypothetical protein Tax=RIFOXYA2_FULL_OD1_Falkowbacteria_47_19_curated
hypothetical protein
RIFOXYA2_FULL_OD1_47_19_rifoxya2_full_scaffold_50_45
RIFOXYA2_FULL_OD1_Falkowbacteria_47_19_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

44512..45246
DNA (735bp) protein (245aa)
Zinc/iron permease n=1 Tax=Halanaerobium hydrogeniformans RepID=E4RK05_HALHG
zinc/iron permease; K07238 zinc transporter, ZIP family Tax=RIFOXYA2_FULL_OD1_Falkowbacteria_47_19_curated
zinc/iron permease
RIFOXYA2_FULL_OD1_47_19_rifoxya2_full_scaffold_50_46
RIFOXYA2_FULL_OD1_Falkowbacteria_47_19_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

45259..46368
DNA (1110bp) protein (370aa)
YibE/F family protein n=1 Tax=uncultured bacterium RepID=K1YLC0_9BACT
hypothetical protein Tax=RIFOXYA2_FULL_OD1_Falkowbacteria_47_19_curated
hypothetical protein
RIFOXYA2_FULL_OD1_47_19_rifoxya2_full_scaffold_50_47
RIFOXYA2_FULL_OD1_Falkowbacteria_47_19_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

46910..47137
DNA (228bp) protein (76aa)
Uncharacterized protein (Fragment) n=1 Tax=uncultured bacterium RepID=K2BY09_9BACT
excinuclease ABC subunit C; K07461 putative endonuclease Tax=RIFOXYA2_FULL_OD1_Falkowbacteria_47_19_curated
excinuclease ABC subunit C
RIFOXYA2_FULL_OD1_47_19_rifoxya2_full_scaffold_50_48
RIFOXYA2_FULL_OD1_Falkowbacteria_47_19_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

47513..47959
DNA (447bp) protein (149aa)
Tax=RIFOXYA2_FULL_OD1_Falkowbacteria_47_19_curated
RIFOXYA2_FULL_OD1_47_19_rifoxya2_full_scaffold_50_49
RIFOXYA2_FULL_OD1_Falkowbacteria_47_19_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

comp(48193..48711)
DNA (519bp) protein (173aa)
id=1981228 Tax=RIFOXYA2_FULL_OD1_Falkowbacteria_47_19_curated
id=1981228 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
RIFOXYA2_FULL_OD1_47_19_rifoxya2_full_scaffold_50_50
RIFOXYA2_FULL_OD1_Falkowbacteria_47_19_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

comp(48812..50098)
DNA (1287bp) protein (429aa)
tig; trigger factor; K03545 trigger factor Tax=RIFOXYA2_FULL_OD1_Falkowbacteria_47_19_curated
Trigger factor id=1981225 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
hypothetical protein
RIFOXYA2_FULL_OD1_47_19_rifoxya2_full_scaffold_50_51
RIFOXYA2_FULL_OD1_Falkowbacteria_47_19_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

comp(50214..50801)
DNA (588bp) protein (196aa)
Hydrolase n=1 Tax=Syntrophus aciditrophicus (strain SB) RepID=Q2LUM2_SYNAS
hydrolase; K07023 putative hydrolases of HD superfamily Tax=RIFOXYA2_FULL_OD1_Falkowbacteria_47_19_curated
hydrolase
RIFOXYA2_FULL_OD1_47_19_rifoxya2_full_scaffold_50_52
RIFOXYA2_FULL_OD1_Falkowbacteria_47_19_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

comp(50840..51772)
DNA (933bp) protein (311aa)
DHHA2 domain-containing protein; K15986 manganese-dependent inorganic pyrophosphatase [EC:3.6.1.1] Tax=RIFOXYA2_FULL_OD1_Falkowbacteria_47_19_curated
DHHA2 domain protein id=1981222 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
DHHA2 domain-containing protein
RIFOXYA2_FULL_OD1_47_19_rifoxya2_full_scaffold_50_53
RIFOXYA2_FULL_OD1_Falkowbacteria_47_19_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

comp(51881..53266)
DNA (1386bp) protein (462aa)
transcription termination factor NusA; K02600 N utilization substance protein A Tax=RIFOXYA2_FULL_OD1_Falkowbacteria_47_19_curated
Transcription termination factor NusA id=1981218 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
transcription termination factor NusA
RIFOXYA2_FULL_OD1_47_19_rifoxya2_full_scaffold_50_54
RIFOXYA2_FULL_OD1_Falkowbacteria_47_19_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

comp(53476..54408)
DNA (933bp) protein (311aa)
Tax=RIFOXYA2_FULL_OD1_Falkowbacteria_47_19_curated
RIFOXYA2_FULL_OD1_47_19_rifoxya2_full_scaffold_50_55
RIFOXYA2_FULL_OD1_Falkowbacteria_47_19_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

54587..55156
DNA (570bp) protein (190aa)
Tax=RIFOXYA2_FULL_OD1_Falkowbacteria_47_19_curated
RIFOXYA2_FULL_OD1_47_19_rifoxya2_full_scaffold_50_56
RIFOXYA2_FULL_OD1_Falkowbacteria_47_19_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

comp(55554..56423)
DNA (870bp) protein (290aa)
Tax=RIFOXYA2_FULL_OD1_Falkowbacteria_47_19_curated
RIFOXYA2_FULL_OD1_47_19_rifoxya2_full_scaffold_50_57
RIFOXYA2_FULL_OD1_Falkowbacteria_47_19_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

comp(56643..57158)
DNA (516bp) protein (172aa)
seg 67..77 Tax=RIFOXYA2_FULL_OD1_Falkowbacteria_47_19_curated
seg 67..77 id=133230 bin=ACD81 species=ACD81 genus=ACD81 taxon_order=ACD81 taxon_class=ACD81 phylum=OD1 tax=ACD81 organism_group=OD1 (Parcubacteria) organism_desc=OD1
RIFOXYA2_FULL_OD1_47_19_rifoxya2_full_scaffold_50_58
RIFOXYA2_FULL_OD1_Falkowbacteria_47_19_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

comp(57567..58349)
DNA (783bp) protein (261aa)
transcriptional regulator, TrmB Tax=RIFOXYA2_FULL_OD1_Falkowbacteria_47_19_curated
transcriptional regulator, TrmB id=3150 bin=ACD11 species=ACD11 genus=ACD11 taxon_order=ACD11 taxon_class=ACD11 phylum=OD1-i tax=ACD11 organism_group=OD1-i organism_desc=OD1-i
RIFOXYA2_FULL_OD1_47_19_rifoxya2_full_scaffold_50_59
RIFOXYA2_FULL_OD1_Falkowbacteria_47_19_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

58553..59095
DNA (543bp) protein (181aa)
Adenine phosphoribosyltransferase n=1 Tax=Clostridium pasteurianum BC1 RepID=R4KC45_CLOPA
adenine phosphoribosyltransferase Tax=RIFOXYA2_FULL_OD1_Falkowbacteria_47_19_curated
adenine phosphoribosyltransferase
RIFOXYA2_FULL_OD1_47_19_rifoxya2_full_scaffold_50_60
RIFOXYA2_FULL_OD1_Falkowbacteria_47_19_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

59114..59404
DNA (291bp) protein (97aa)
Tax=RIFOXYA2_FULL_OD1_Falkowbacteria_47_19_curated
Displaying items 31-60 of 249 in total

View Taxonomy