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RIFOXYA2_FULL_OD1_47_19_rifoxya2_full_scaffold_34

Search features with annotation key words

Displaying items 61-90 of 154 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFOXYA2_FULL_OD1_47_19_rifoxya2_full_scaffold_34_61
RIFOXYA2_FULL_OD1_Falkowbacteria_47_19_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

comp(74747..75541)
DNA (795bp) protein (265aa)
membrane-associated zinc metalloprotease; K11749 regulator of sigma E protease [EC:3.4.24.-] Tax=RIFOXYA2_FULL_OD1_Falkowbacteria_47_19_curated
Membrane-associated zinc metalloprotease n=1 Tax=Desulfococcus multivorans DSM 2059 RepID=S7V4A0_DESML
membrane-associated zinc metalloprotease
RIFOXYA2_FULL_OD1_47_19_rifoxya2_full_scaffold_34_62
RIFOXYA2_FULL_OD1_Falkowbacteria_47_19_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

comp(75687..76331)
DNA (645bp) protein (215aa)
Tax=RIFOXYA2_FULL_OD1_Falkowbacteria_47_19_curated
RIFOXYA2_FULL_OD1_47_19_rifoxya2_full_scaffold_34_63
RIFOXYA2_FULL_OD1_Falkowbacteria_47_19_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

comp(76354..77757)
DNA (1404bp) protein (468aa)
Tax=RIFOXYA2_FULL_OD1_Falkowbacteria_47_19_curated
RIFOXYA2_FULL_OD1_47_19_rifoxya2_full_scaffold_34_64
RIFOXYA2_FULL_OD1_Falkowbacteria_47_19_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

77933..78592
DNA (660bp) protein (220aa)
exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase (EC:2.7.8.6) Tax=RIFOXYA2_FULL_OD1_Falkowbacteria_47_19_curated
exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase (EC:2.7.8.6)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA011-J21 RepID=UPI000363F841
RIFOXYA2_FULL_OD1_47_19_rifoxya2_full_scaffold_34_65
RIFOXYA2_FULL_OD1_Falkowbacteria_47_19_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

78844..79413
DNA (570bp) protein (190aa)
signal peptidase I (EC:3.4.21.89); K03100 signal peptidase I [EC:3.4.21.89] Tax=RIFOXYA2_FULL_OD1_Falkowbacteria_47_19_curated
signal peptidase I (EC:3.4.21.89)
Signal peptidase I id=1899026 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
RIFOXYA2_FULL_OD1_47_19_rifoxya2_full_scaffold_34_66
RIFOXYA2_FULL_OD1_Falkowbacteria_47_19_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

comp(79424..79957)
DNA (534bp) protein (178aa)
RNA polymerase factor sigma C; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RIFOXYA2_FULL_OD1_Falkowbacteria_47_19_curated
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily id=5802134 bin=PER_GWA2_38_35 species=PERA2_38_36 genus=PERA2_38_36 taxon_order=PERA2_38_36 taxon_class=PERA2_38_36 phylum=PER tax=PER_GWA2_38_35 organism_group=PER (Peregrinibacteria) organism_desc=This is the curated version (7 contigs can be represented as 5 scaffolds)
ECF subfamily RNA polymerase sigma-24 subunit
RIFOXYA2_FULL_OD1_47_19_rifoxya2_full_scaffold_34_67
RIFOXYA2_FULL_OD1_Falkowbacteria_47_19_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

80020..80853
DNA (834bp) protein (278aa)
Putative uncharacterized protein Tax=RIFOXYA2_FULL_OD1_Falkowbacteria_47_19_curated
Putative uncharacterized protein id=3012501 bin=GWC1_OD1_38_17 species=PER_GWF2_33_10 genus=PER_GWF2_33_10 taxon_order=PER_GWF2_33_10 taxon_class=PER_GWF2_33_10 phylum=PER tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
RIFOXYA2_FULL_OD1_47_19_rifoxya2_full_scaffold_34_68
RIFOXYA2_FULL_OD1_Falkowbacteria_47_19_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

comp(80985..82034)
DNA (1050bp) protein (350aa)
Tax=RIFOXYA2_FULL_OD1_Falkowbacteria_47_19_curated
RIFOXYA2_FULL_OD1_47_19_rifoxya2_full_scaffold_34_69
RIFOXYA2_FULL_OD1_Falkowbacteria_47_19_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

82491..83933
DNA (1443bp) protein (481aa)
Tax=RIFOXYA2_FULL_OD1_Falkowbacteria_47_19_curated
RIFOXYA2_FULL_OD1_47_19_rifoxya2_full_scaffold_34_70
RIFOXYA2_FULL_OD1_Falkowbacteria_47_19_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

comp(84016..84522)
DNA (507bp) protein (169aa)
Tax=RIFOXYA2_FULL_OD1_Falkowbacteria_47_19_curated
RIFOXYA2_FULL_OD1_47_19_rifoxya2_full_scaffold_34_71
RIFOXYA2_FULL_OD1_Falkowbacteria_47_19_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

comp(84644..85033)
DNA (390bp) protein (130aa)
Tax=RIFOXYA2_FULL_OD1_Falkowbacteria_47_19_curated
RIFOXYA2_FULL_OD1_47_19_rifoxya2_full_scaffold_34_72
RIFOXYA2_FULL_OD1_Falkowbacteria_47_19_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

comp(85229..85861)
DNA (633bp) protein (211aa)
Serine protease Tax=RIFOXYA2_FULL_OD1_Falkowbacteria_47_19_curated
Serine protease id=1816703 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
RIFOXYA2_FULL_OD1_47_19_rifoxya2_full_scaffold_34_73
RIFOXYA2_FULL_OD1_Falkowbacteria_47_19_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

comp(86155..86673)
DNA (519bp) protein (173aa)
Tax=RIFOXYA2_FULL_OD1_Falkowbacteria_47_19_curated
RIFOXYA2_FULL_OD1_47_19_rifoxya2_full_scaffold_34_74
RIFOXYA2_FULL_OD1_Falkowbacteria_47_19_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

comp(87167..87580)
DNA (414bp) protein (138aa)
Tax=RIFOXYA2_FULL_OD1_Falkowbacteria_47_19_curated
RIFOXYA2_FULL_OD1_47_19_rifoxya2_full_scaffold_34_75
RIFOXYA2_FULL_OD1_Falkowbacteria_47_19_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

87772..88335
DNA (564bp) protein (188aa)
RNA polymerase ECF-type sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RIFOXYA2_FULL_OD1_Falkowbacteria_47_19_curated
ECF subfamily RNA polymerase sigma factor id=2193976 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
RNA polymerase ECF-type sigma factor
RIFOXYA2_FULL_OD1_47_19_rifoxya2_full_scaffold_34_76
RIFOXYA2_FULL_OD1_Falkowbacteria_47_19_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

88406..90133
DNA (1728bp) protein (576aa)
transmembrane_regions Tax=RIFOXYA2_FULL_OD1_Falkowbacteria_47_19_curated
transmembrane_regions id=5801329 bin=GWE2_OD1_42_8 species=GW2011_OD1_1 genus=GW2011_OD1_1 taxon_order=GW2011_OD1_1 taxon_class=GW2011_OD1_1 phylum=OD1 tax=GWE2_OD1_42_8 organism_group=OD1 (Parcubacteria) organism_desc=GW2011_OD1_1 GW2011_A
RIFOXYA2_FULL_OD1_47_19_rifoxya2_full_scaffold_34_77
RIFOXYA2_FULL_OD1_Falkowbacteria_47_19_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

comp(90198..91310)
DNA (1113bp) protein (371aa)
Metallophosphoesterase n=1 Tax=uncultured bacterium RepID=K2E0I2_9BACT
integral membrane protein; K07098 Tax=RIFOXYA2_FULL_OD1_Falkowbacteria_47_19_curated
integral membrane protein
RIFOXYA2_FULL_OD1_47_19_rifoxya2_full_scaffold_34_78
RIFOXYA2_FULL_OD1_Falkowbacteria_47_19_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

91454..93148
DNA (1695bp) protein (565aa)
sodium/hydrogen exchanger Tax=RIFOXYA2_FULL_OD1_Falkowbacteria_47_19_curated
sodium/hydrogen exchanger id=13505 bin=ACD18 species=ACD18 genus=ACD18 taxon_order=ACD18 taxon_class=ACD18 phylum=OD1 tax=ACD18 organism_group=OD1 (Parcubacteria) organism_desc= OD1
Transporter, CPA2 family
RIFOXYA2_FULL_OD1_47_19_rifoxya2_full_scaffold_34_79
RIFOXYA2_FULL_OD1_Falkowbacteria_47_19_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

93327..94985
DNA (1659bp) protein (553aa)
glycerol-3-phosphate dehydrogenase; K00111 glycerol-3-phosphate dehydrogenase [EC:1.1.5.3] Tax=RIFOXYA2_FULL_OD1_Falkowbacteria_47_19_curated
FAD dependent oxidoreductase id=1804998 bin=GWE2_Bacteroidetes_32_14 species=delta proteobacterium NaphS2 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWE2_Bacteroidetes_32_14 organism_group=Bacteroidetes organism_desc=Good +
glycerol-3-phosphate dehydrogenase
RIFOXYA2_FULL_OD1_47_19_rifoxya2_full_scaffold_34_80
RIFOXYA2_FULL_OD1_Falkowbacteria_47_19_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

94992..96032
DNA (1041bp) protein (347aa)
Tax=RIFOXYA2_FULL_OD1_Falkowbacteria_47_19_curated
RIFOXYA2_FULL_OD1_47_19_rifoxya2_full_scaffold_34_81
RIFOXYA2_FULL_OD1_Falkowbacteria_47_19_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

96232..96372
DNA (141bp) protein (47aa)
Tax=RIFOXYA2_FULL_OD1_Falkowbacteria_47_19_curated
RIFOXYA2_FULL_OD1_47_19_rifoxya2_full_scaffold_34_82
RIFOXYA2_FULL_OD1_Falkowbacteria_47_19_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

comp(96451..97002)
DNA (552bp) protein (184aa)
Uncharacterized protein n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MI26_9BACT
hypothetical protein Tax=RIFOXYA2_FULL_OD1_Falkowbacteria_47_19_curated
hypothetical protein
RIFOXYA2_FULL_OD1_47_19_rifoxya2_full_scaffold_34_83
RIFOXYA2_FULL_OD1_Falkowbacteria_47_19_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

97438..98373
DNA (936bp) protein (312aa)
Tax=RIFOXYA2_FULL_OD1_Falkowbacteria_47_19_curated
RIFOXYA2_FULL_OD1_47_19_rifoxya2_full_scaffold_34_84
RIFOXYA2_FULL_OD1_Falkowbacteria_47_19_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

98497..99303
DNA (807bp) protein (269aa)
hypothetical protein Tax=RIFOXYA2_FULL_OD1_Falkowbacteria_47_19_curated
hypothetical protein id=5085257 bin=GWA2_OP11_43_14 species=GWA2_OP11 genus=GWA2_OP11 taxon_order=GWA2_OP11 taxon_class=GWA2_OP11 phylum=OP11 tax=GWA2_OP11_43_14 organism_group=OP11 (Microgenomates) organism_desc=GWA2_OP11_2
RIFOXYA2_FULL_OD1_47_19_rifoxya2_full_scaffold_34_85
RIFOXYA2_FULL_OD1_Falkowbacteria_47_19_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

99487..99771
DNA (285bp) protein (95aa)
hypothetical protein Tax=RIFOXYA2_FULL_OD1_Falkowbacteria_47_19_curated
transmembrane_regions id=5801506 bin=GWE2_OD1_42_8 species=GW2011_OD1_1 genus=GW2011_OD1_1 taxon_order=GW2011_OD1_1 taxon_class=GW2011_OD1_1 phylum=OD1 tax=GWE2_OD1_42_8 organism_group=OD1 (Parcubacteria) organism_desc=GW2011_OD1_1 GW2011_A
hypothetical protein
RIFOXYA2_FULL_OD1_47_19_rifoxya2_full_scaffold_34_86
RIFOXYA2_FULL_OD1_Falkowbacteria_47_19_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

99910..100209
DNA (300bp) protein (100aa)
Tax=RIFOXYA2_FULL_OD1_Falkowbacteria_47_19_curated
RIFOXYA2_FULL_OD1_47_19_rifoxya2_full_scaffold_34_87
RIFOXYA2_FULL_OD1_Falkowbacteria_47_19_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

comp(100293..103469)
DNA (3177bp) protein (1059aa)
acriflavin resistance protein Tax=RIFOXYA2_FULL_OD1_Falkowbacteria_47_19_curated
acriflavin resistance protein id=5091471 bin=GWC2_PER_33_13 species=PER_GWC2_33_13 genus=PER_GWC2_33_13 taxon_order=PER_GWC2_33_13 taxon_class=PER_GWC2_33_13 phylum=PER tax=GWC2_PER_33_13 organism_group=PER (Peregrinibacteria) organism_desc=No RuBisCO in this genome
acriflavin resistance protein
RIFOXYA2_FULL_OD1_47_19_rifoxya2_full_scaffold_34_88
RIFOXYA2_FULL_OD1_Falkowbacteria_47_19_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

comp(103549..105402)
DNA (1854bp) protein (618aa)
Secretion protein HlyD n=1 Tax=NC10 bacterium 'Dutch sediment' RepID=D5MGV1_9BACT id=124431 bin=ACD78 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=ACD78 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
HlyD family secretion protein Tax=RIFOXYA2_FULL_OD1_Falkowbacteria_47_19_curated
HlyD family secretion protein
RIFOXYA2_FULL_OD1_47_19_rifoxya2_full_scaffold_34_89
RIFOXYA2_FULL_OD1_Falkowbacteria_47_19_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

105557..106696
DNA (1140bp) protein (380aa)
multi-sensor signal transduction histidine kinase Tax=RIFOXYA2_FULL_OD1_Falkowbacteria_47_19_curated
Integral membrane sensor signal transduction histidine kinase id=1743845 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
multi-sensor signal transduction histidine kinase
RIFOXYA2_FULL_OD1_47_19_rifoxya2_full_scaffold_34_90
RIFOXYA2_FULL_OD1_Falkowbacteria_47_19_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

106729..107121
DNA (393bp) protein (131aa)
PAS domain-containing protein Tax=RIFOXYA2_FULL_OD1_Falkowbacteria_47_19_curated
Two component, sigma54 specific, transcriptional regulator, Fis family id=1797413 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
PAS domain-containing protein
Displaying items 61-90 of 154 in total

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