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RIFOXYD1_FULL_CPR_37_110_rifoxyd1_full_scaffold_608

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Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFOXYD1_FULL_CPR_37_110_rifoxyd1_full_scaffold_608_1
RIFOXYB1_FULL_RIF_OD1_06_37_44_curated, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

comp(1..591)
DNA (591bp) protein (197aa)
putative type-1 restriction enzyme MjaXP specificity protein; K01154 type I restriction enzyme, S subunit [EC:3.1.21.3] Tax=RIFOXYB1_FULL_RIF_OD1_06_37_44_curated
Restriction modification system DNA specificity domain n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HQI2_9FIRM
restriction modification system DNA specificity domain-containing protein
RIFOXYD1_FULL_CPR_37_110_rifoxyd1_full_scaffold_608_2
RIFOXYB1_FULL_RIF_OD1_06_37_44_curated, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

comp(597..1082)
DNA (486bp) protein (162aa)
hypothetical protein Tax=RIFOXYB1_FULL_RIF_OD1_06_37_44_curated
Putative uncharacterized protein id=4968410 bin=GWA2_CPR4_42_17 species=ACD80 genus=ACD80 taxon_order=ACD80 taxon_class=ACD80 phylum=SR1 tax=GWA2_CPR4_42_17 organism_group=CPR4 organism_desc=from megabin
hypothetical protein
RIFOXYD1_FULL_CPR_37_110_rifoxyd1_full_scaffold_608_3
RIFOXYB1_FULL_RIF_OD1_06_37_44_curated, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

comp(1069..1371)
DNA (303bp) protein (101aa)
seg 337..346 Tax=RIFOXYB1_FULL_RIF_OD1_06_37_44_curated
seg 337..346 id=52285 bin=ACD40 species=ACD40 genus=ACD40 taxon_order=ACD40 taxon_class=ACD40 phylum=OP11 tax=ACD40 organism_group=OP11 (Microgenomates) organism_desc=OP11
RIFOXYD1_FULL_CPR_37_110_rifoxyd1_full_scaffold_608_4
RIFOXYB1_FULL_RIF_OD1_06_37_44_curated, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

comp(1551..1751)
DNA (201bp) protein (67aa)
Tax=RIFOXYB1_FULL_RIF_OD1_06_37_44_curated
RIFOXYD1_FULL_CPR_37_110_rifoxyd1_full_scaffold_608_5
RIFOXYB1_FULL_RIF_OD1_06_37_44_curated, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

comp(1792..2340)
DNA (549bp) protein (183aa)
hypothetical protein Tax=RIFOXYB1_FULL_RIF_OD1_06_37_44_curated
id=15191800 bin=GWC1_OP11_49_16_COMPLETE tax=GWC1_OP11_49_16_COMPLETE organism_group=OP11 (Microgenomates)
hypothetical protein
RIFOXYD1_FULL_CPR_37_110_rifoxyd1_full_scaffold_608_6
RIFOXYB1_FULL_RIF_OD1_06_37_44_curated, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

comp(2337..4121)
DNA (1785bp) protein (595aa)
Site-specific DNA-methyltransferase (adenine-specific) (EC:2.1.1.72); K03427 type I restriction enzyme M protein [EC:2.1.1.72] Tax=RIFOXYB1_FULL_RIF_OD1_06_37_44_curated
Site-specific DNA-methyltransferase (adenine-specific) (EC:2.1.1.72)
Site-specific DNA-methyltransferase (Adenine-specific) n=1 Tax=Caldicellulosiruptor owensensis (strain ATCC 700167 / DSM 13100 / OL) RepID=E4Q673_CALOW
RIFOXYD1_FULL_CPR_37_110_rifoxyd1_full_scaffold_608_7
RIFOXYB1_FULL_RIF_OD1_06_37_44_curated, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

4590..6341
DNA (1752bp) protein (584aa)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI00035E2C1A
Type II secretion system protein E Tax=RIFOXYB1_FULL_RIF_OD1_06_37_44_curated
secretion system protein E
RIFOXYD1_FULL_CPR_37_110_rifoxyd1_full_scaffold_608_8
RIFOXYB1_FULL_RIF_OD1_06_37_44_curated, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

6350..6685
DNA (336bp) protein (112aa)
excinuclease ABC subunit C Tax=RIFOXYB1_FULL_RIF_OD1_06_37_44_curated
Excinuclease ABC subunit C domain-containing protein; K07461 putative endonuclease id=5803333 bin=OD1_GWC2_34_28 species=ACD1 genus=ACD1 taxon_order=ACD1 taxon_class=ACD1 phylum=OD1-i tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
excinuclease ABC subunit C
RIFOXYD1_FULL_CPR_37_110_rifoxyd1_full_scaffold_608_9
RIFOXYB1_FULL_RIF_OD1_06_37_44_curated, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

6857..8071
DNA (1215bp) protein (405aa)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI00037114F0
type II secretion system F domain-containing protein; K02653 type IV pilus assembly protein PilC Tax=RIFOXYB1_FULL_RIF_OD1_06_37_44_curated
type II secretion system F domain-containing protein
RIFOXYD1_FULL_CPR_37_110_rifoxyd1_full_scaffold_608_10
RIFOXYB1_FULL_RIF_OD1_06_37_44_curated, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

8167..12027
DNA (3861bp) protein (1287aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1XFA1_9BACT
hypothetical protein Tax=RIFOXYB1_FULL_RIF_OD1_06_37_44_curated
hypothetical protein
RIFOXYD1_FULL_CPR_37_110_rifoxyd1_full_scaffold_608_11
RIFOXYB1_FULL_RIF_OD1_06_37_44_curated, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

12043..13719
DNA (1677bp) protein (559aa)
LamG domain-containing protein Tax=RIFOXYB1_FULL_RIF_OD1_06_37_44_curated
MshQ-like protein id=1245532 bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
hypothetical protein
RIFOXYD1_FULL_CPR_37_110_rifoxyd1_full_scaffold_608_12
RIFOXYB1_FULL_RIF_OD1_06_37_44_curated, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

13833..15674
DNA (1842bp) protein (614aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1ZH83_9BACT
Uncharacterized protein Tax=RIFOXYB1_FULL_RIF_OD1_06_37_44_curated
RIFOXYD1_FULL_CPR_37_110_rifoxyd1_full_scaffold_608_13
RIFOXYB1_FULL_RIF_OD1_06_37_44_curated, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

15719..16096
DNA (378bp) protein (126aa)
Tax=RIFOXYB1_FULL_RIF_OD1_06_37_44_curated
RIFOXYD1_FULL_CPR_37_110_rifoxyd1_full_scaffold_608_14
RIFOXYB1_FULL_RIF_OD1_06_37_44_curated, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

16133..17095
DNA (963bp) protein (321aa)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI0003795D65
type IV pilus assembly protein PilM; K02662 type IV pilus assembly protein PilM Tax=RIFOXYB1_FULL_RIF_OD1_06_37_44_curated
hypothetical protein
RIFOXYD1_FULL_CPR_37_110_rifoxyd1_full_scaffold_608_15
RIFOXYB1_FULL_RIF_OD1_06_37_44_curated, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

17088..17627
DNA (540bp) protein (180aa)
id=3486139 Tax=RIFOXYB1_FULL_RIF_OD1_06_37_44_curated
id=3486139 bin=GWA1_ZB2_49_26 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA1_ZB2_49_26 organism_group=ZB2 organism_desc=Good
RIFOXYD1_FULL_CPR_37_110_rifoxyd1_full_scaffold_608_16
RIFOXYB1_FULL_RIF_OD1_06_37_44_curated, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

17630..18175
DNA (546bp) protein (182aa)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI00036F51FA
hypothetical protein Tax=RIFOXYB1_FULL_RIF_OD1_06_37_44_curated
RIFOXYD1_FULL_CPR_37_110_rifoxyd1_full_scaffold_608_17
RIFOXYB1_FULL_RIF_OD1_06_37_44_curated, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

18181..18501
DNA (321bp) protein (107aa)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI00035CD86D
hypothetical protein Tax=RIFOXYB1_FULL_RIF_OD1_06_37_44_curated
RIFOXYD1_FULL_CPR_37_110_rifoxyd1_full_scaffold_608_18
RIFOXYB1_FULL_RIF_OD1_06_37_44_curated, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

comp(18962..19564)
DNA (603bp) protein (201aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2EK69_9BACT
Uncharacterized protein Tax=RIFOXYB1_FULL_RIF_OD1_06_37_44_curated
RIFOXYD1_FULL_CPR_37_110_rifoxyd1_full_scaffold_608_19
RIFOXYB1_FULL_RIF_OD1_06_37_44_curated, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

comp(19758..20507)
DNA (750bp) protein (250aa)
tRNA (guanine-N1)-methyltransferase (EC:2.1.1.31); K00554 tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228] Tax=RIFOXYB1_FULL_RIF_OD1_06_37_44_curated
tRNA (guanine-N1)-methyltransferase (EC:2.1.1.31)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI00037CD837
RIFOXYD1_FULL_CPR_37_110_rifoxyd1_full_scaffold_608_20
RIFOXYB1_FULL_RIF_OD1_06_37_44_curated, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

comp(20688..21002)
DNA (315bp) protein (105aa)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI000369925F
hypothetical protein Tax=RIFOXYB1_FULL_RIF_OD1_06_37_44_curated
hypothetical protein
RIFOXYD1_FULL_CPR_37_110_rifoxyd1_full_scaffold_608_21
RIFOXYB1_FULL_RIF_OD1_06_37_44_curated, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

comp(21283..21732)
DNA (450bp) protein (150aa)
Transcriptional regulator, TraR/DksA family n=1 Tax=Pirellula staleyi (strain ATCC 27377 / DSM 6068 / ICPB 4128) RepID=D2R2J7_PIRSD
TraR/DksA family transcriptional regulator; K06204 DnaK suppressor protein Tax=RIFOXYB1_FULL_RIF_OD1_06_37_44_curated
TraR/DksA family transcriptional regulator
RIFOXYD1_FULL_CPR_37_110_rifoxyd1_full_scaffold_608_22
RIFOXYB1_FULL_RIF_OD1_06_37_44_curated, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists


comp(21939..22355)
DNA (417bp) protein (139aa)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI00036D38F0
hypothetical protein Tax=RIFOXYB1_FULL_RIF_OD1_06_37_44_curated
rpsP; 30S ribosomal protein S16
RIFOXYD1_FULL_CPR_37_110_rifoxyd1_full_scaffold_608_23
RIFOXYB1_FULL_RIF_OD1_06_37_44_curated, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

comp(22470..23285)
DNA (816bp) protein (272aa)
putative ribonuclease III (EC:3.1.26.3) Tax=RIFOXYB1_FULL_RIF_OD1_06_37_44_curated
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI000379C34A
hypothetical protein
RIFOXYD1_FULL_CPR_37_110_rifoxyd1_full_scaffold_608_24
RIFOXYB1_FULL_RIF_OD1_06_37_44_curated, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

comp(23242..23667)
DNA (426bp) protein (142aa)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI0003706B9D
putative transcription termination factor Tax=RIFOXYB1_FULL_RIF_OD1_06_37_44_curated
putative transcription termination factor
RIFOXYD1_FULL_CPR_37_110_rifoxyd1_full_scaffold_608_25
RIFOXYB1_FULL_RIF_OD1_06_37_44_curated, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists


comp(23776..24015)
DNA (240bp) protein (80aa)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI00035F3F5F
50S ribosomal protein L32; K02911 large subunit ribosomal protein L32 Tax=RIFOXYB1_FULL_RIF_OD1_06_37_44_curated
50S ribosomal protein L32
RIFOXYD1_FULL_CPR_37_110_rifoxyd1_full_scaffold_608_26
RIFOXYB1_FULL_RIF_OD1_06_37_44_curated, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

comp(24074..24514)
DNA (441bp) protein (147aa)
Tax=RIFOXYB1_FULL_RIF_OD1_06_37_44_curated
RIFOXYD1_FULL_CPR_37_110_rifoxyd1_full_scaffold_608_27
RIFOXYB1_FULL_RIF_OD1_06_37_44_curated, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

comp(24539..25354)
DNA (816bp) protein (272aa)
rnhB; ribonuclease HII (EC:3.1.26.4)
hypothetical protein Tax=RIFOXYB1_FULL_RIF_OD1_06_37_44_curated
Ribonuclease HII id=3013150 bin=GWC1_OD1_38_17 species=Fusobacterium varium genus=Fusobacterium taxon_order=Fusobacteriales taxon_class=Fusobacteriia phylum=Fusobacteria tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
Displaying 27 items

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