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RIFOXYD1_FULL_CPR_37_110_rifoxyd1_full_scaffold_5137_6

Organism: Candidatus Staskawiczbacteria bacterium RIFOXYD1_FULL_37_110

near complete RP 44 / 55 MC: 1 BSCG 46 / 51 MC: 1 ASCG 10 / 38 MC: 1
Location: 5284..6423

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma 38 subunit, RpoS; K03086 RNA polymerase primary sigma factor Tax=RIFOXYB1_FULL_RIF_OD1_06_37_44_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 379.0
  • Bit_score: 733
  • Evalue 1.90e-208
RNA polymerase sigma factor id=2669954 bin=GWA1_ZB2_49_26 species=ACD15 genus=ACD15 taxon_order=ACD15 taxon_class=ACD15 phylum=OD1-i tax=GWA1_ZB2_49_26 organism_group=ZB2 organism_desc=Good similarity UNIREF
DB: UNIREF100
  • Identity: 64.0
  • Coverage: 381.0
  • Bit_score: 488
  • Evalue 7.60e-135
RNA polymerase, sigma 38 subunit, RpoS similarity KEGG
DB: KEGG
  • Identity: 57.4
  • Coverage: 366.0
  • Bit_score: 382
  • Evalue 1.70e-103

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Taxonomy

RIFOXYB1_FULL_RIF_OD1_06_37_44_curated → RIF-OD1-6 → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 1140
ATGACAAAGAAAAAAGTAAAAAAAGTTGCAAAGAAAAAGATGCCGCGCAAAATAGAACGGGTGAGCAAAAAATCTGTTATTGATCCTGCGCAATTGGCAACGCTTATACGAAAGGGCGAAGAAAGGGGTTTTATCACAACCTCGGAAATTTTGTATGCTTTTCCAAAAATTGAGTATGATGTTGAAGGTTTGGAAAAAGTTTACGATGATTTTAAAGAAAGGGGAGTTGCCGTAAAAGAAGTGCAGGAGTTTCTGGAAACAAAAAAACAAAAAGAAAAAAAATCAAAAAAAGCGCTTATTGGAAAAATTGACCCGATACAAATGTATTTGAAAGAAATTGGAAAGTCTGGATTTTTGTCTGCAAAAGAAGAAAAAGAATTGGCAAAAAGAATTGAGGCAAACGATGAAGAAGCAAAAAATAAACTGGCTTTGGCAAATTTGAGGCTGGTGGTTTCAATTGCAAAAAAATATGTCGGCAGGAGCCCGAATTTAACTTTGCTTGATTTAATCCAAGAAGGAAATTTAGGGTTGTTTAAAGCAGTTAAAAAATTCGATTGGAGAAAAGGATACAAATTTTCAACTTACGCAACTTGGTGGATTAGGCAATCCATAACCAGGGCATTGGCAGACCAAGCAAGGACAATCCGCATTCCCGTGCATATGATTGAAACAATTTCAAAATATACAAAAATCAGGAAAAATTTATTGCAAGAACTTGGCAGAGAACCTTTGGCCGAAGAAATTGCCGCAGAAATGGGTTTGGAAGTTGAGAAGGTCCATCATATAAGAAAAATTGCTCAAAAAGCTGTTTCTTTGGAAACTCCGGTTGGCGAAGACAAAGACAAACAAGACAGCGTTTTGGCGGAATTTATAAAAGACGACAAAACAATTGCCCCAAATACCGAAGCCGCCAGAAAACTTTTAAAAGACAGGCTTAAAGAAATCTCAAGCGAATTAACTCCAAGAGAACTTAAAATTTTGGGAATGAGGTTTGGTTTGGACGATGGCGTAATGCACACGCTTGAAGAAACAGGTGAAGAGTTTGGAGTAACTCGTGAAAGAATTAGGCAAATTCAAGCAAAAGCTTTGGAAAAATTACGAAAGCACAGAGAACTCAAAAAGGTCCGCGATTATTACTAA
PROTEIN sequence
Length: 380
MTKKKVKKVAKKKMPRKIERVSKKSVIDPAQLATLIRKGEERGFITTSEILYAFPKIEYDVEGLEKVYDDFKERGVAVKEVQEFLETKKQKEKKSKKALIGKIDPIQMYLKEIGKSGFLSAKEEKELAKRIEANDEEAKNKLALANLRLVVSIAKKYVGRSPNLTLLDLIQEGNLGLFKAVKKFDWRKGYKFSTYATWWIRQSITRALADQARTIRIPVHMIETISKYTKIRKNLLQELGREPLAEEIAAEMGLEVEKVHHIRKIAQKAVSLETPVGEDKDKQDSVLAEFIKDDKTIAPNTEAARKLLKDRLKEISSELTPRELKILGMRFGLDDGVMHTLEETGEEFGVTRERIRQIQAKALEKLRKHRELKKVRDYY*