ggKbase home page

RIFOXYD1_FULL_CPR_37_110_rifoxyd1_full_scaffold_326_18

Organism: Candidatus Staskawiczbacteria bacterium RIFOXYD1_FULL_37_110

near complete RP 44 / 55 MC: 1 BSCG 46 / 51 MC: 1 ASCG 10 / 38 MC: 1
Location: 14554..15975

Top 3 Functional Annotations

Value Algorithm Source
protein-export membrane protein SecD; K03072 preprotein translocase subunit SecD Tax=RIFOXYB1_FULL_RIF_OD1_06_37_44_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 473.0
  • Bit_score: 920
  • Evalue 8.10e-265
Preprotein translocase subunit SecD id=3152090 bin=GWC1_OD1_38_17 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation similarity UNIREF
DB: UNIREF100
  • Identity: 51.3
  • Coverage: 478.0
  • Bit_score: 463
  • Evalue 1.90e-127
protein-export membrane protein SecD similarity KEGG
DB: KEGG
  • Identity: 44.7
  • Coverage: 416.0
  • Bit_score: 321
  • Evalue 4.30e-85

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RIFOXYB1_FULL_RIF_OD1_06_37_44_curated → RIF-OD1-6 → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 1422
ATGGCACAGAAATATTATATATTTTTTGGAGTAATTGTCCTGGCAATTCTTGCCGGGATTTTTGCATATCCAAATTATTACAATAAATCAGTTGATTATTTGAACCACAAAATGTCGTGGACACTTCCGCATTTTTTTGAAAAGCCATATGTTTTGGGGCTTGATTTGCAAGGGGGGGTCAGTTTGGTTTATCAGGCAGATTTAAGCCAGACGGCAGATAAAACAGGCGCAATGTCCGGGTTAAGAGATGTAATTGAAAGAAGGGTAAATATGTTTGGAGTTTCCGAGCCTATTGTGCAAATTCAGGGTCAAGACCGGTTGCTTGTGGAGTTGCCCGGAGTTACAAATGTTGAGCAGGCAATTTCAATGATTGGCCAAACTCCATATTTGGAATTTGACGAAGAAAGAACCGCCGAAGAAACCAAACAAATTTTGGATATTATAAAACAAGTCCAGGACGCTCAAACAAAAAAAGAGGACGTTACAAAAATTGCAAATTGGCAGCAAGCTTTGCAGAATCCGTATTTTAAACCAACAGATTTAACTGGAAAATATTTAACAAGAGCATCTGTTATTTTTGACCCGACAACTTATAAGCCTCAAATTCAATTACAGTTTAACGCGGAAGGCGATAAAATTTTTGCAGATGTCAGTGGCAGAAATATTAAAAAGCCTTTGGCGATATTTTTGGATGGAGCTTCTATTATAGACACTAATGGCGATGGAAAAATTGACGGCCAAGATATGTATGCTCCAATTGTTGAAAACAAAATTACAGGCGGAAAAGCGGTAATTACAGGTGACATGAGCACGCAAGCTGCTAACTCCCTTGCGTCTAGATTAAATTCAGGAGCTTTGCCTGTGAAAATTGGGAGTCCGATTTCGCAAGAAACTGTTGGGCCAACTTTGGGAGCTGTTTCTCTTCAGAAATCGCTTGTAGCAGGACTGTTTGGCCTTCTGGCAGTAGTTATTTTTATGGTAGTGTTTTATAGGTTTCCGGGGGTGCTGGCCAGCTTTGCCCTTGTGGTGTATGTGGCTCTGACTCTGGCCATTTTCAAGCTCATTCCCGTAACCTTGACCTTGGCAGGCATTGGAGGTTTTATACTTTCTATCGGAATGGCGGTTGACGCGAATATTTTAATTTTCGCCAGAATGAAAGAAGAAATAAAATCCGGAAAAGGTTTGGCTCAGTCAATTGATGAGGGCTTTAAAAGAGCCTGGCCGTCAATTCGCGATAGCAACTTTAACTCTTTAATTGTTTGCGTGATTTTATTTTTTGTAGCAACCTCTTTTATCAAAGGATTTGCTTTTACTTTGGCGTTGGGCATTATTGTTTCATTATTTTCGGCAATATTCATAACAAGAATATTCTTAATGGTTTTTATTGGCAAGTGGGCCGAAAAAGCCAAATGGATTCTATAA
PROTEIN sequence
Length: 474
MAQKYYIFFGVIVLAILAGIFAYPNYYNKSVDYLNHKMSWTLPHFFEKPYVLGLDLQGGVSLVYQADLSQTADKTGAMSGLRDVIERRVNMFGVSEPIVQIQGQDRLLVELPGVTNVEQAISMIGQTPYLEFDEERTAEETKQILDIIKQVQDAQTKKEDVTKIANWQQALQNPYFKPTDLTGKYLTRASVIFDPTTYKPQIQLQFNAEGDKIFADVSGRNIKKPLAIFLDGASIIDTNGDGKIDGQDMYAPIVENKITGGKAVITGDMSTQAANSLASRLNSGALPVKIGSPISQETVGPTLGAVSLQKSLVAGLFGLLAVVIFMVVFYRFPGVLASFALVVYVALTLAIFKLIPVTLTLAGIGGFILSIGMAVDANILIFARMKEEIKSGKGLAQSIDEGFKRAWPSIRDSNFNSLIVCVILFFVATSFIKGFAFTLALGIIVSLFSAIFITRIFLMVFIGKWAEKAKWIL*