ggKbase home page

RIFOXYD12_FULL_OD1_34_57_rifoxyd3_full_scaffold_30

Search features with annotation key words

Displaying items 61-90 of 103 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFOXYD12_FULL_OD1_34_57_rifoxyd3_full_scaffold_30_61
RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

65808..66293
DNA (486bp) protein (162aa)
Uncharacterized protein n=1 Tax=Methanosaeta harundinacea (strain 6Ac) RepID=G7WLH8_METH6
hypothetical protein Tax=RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated
hypothetical protein
RIFOXYD12_FULL_OD1_34_57_rifoxyd3_full_scaffold_30_62
RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

66301..67359
DNA (1059bp) protein (353aa)
cls; cardiolipin synthetase; K06131 cardiolipin synthase [EC:2.7.8.-] Tax=RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated
Major cardiolipin synthase ClsA id=2076272 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
cls; cardiolipin synthetase
RIFOXYD12_FULL_OD1_34_57_rifoxyd3_full_scaffold_30_63
RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

comp(67460..67882)
DNA (423bp) protein (141aa)
ribonuclease H Tax=RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated
Ribonuclease H id=2076425 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
ribonuclease H
RIFOXYD12_FULL_OD1_34_57_rifoxyd3_full_scaffold_30_64
RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

comp(67899..69629)
DNA (1731bp) protein (577aa)
single-stranded-DNA-specific exonuclease RecJ; K07462 single-stranded-DNA-specific exonuclease [EC:3.1.-.-] Tax=RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated
Single-stranded-DNA-specific exonuclease RecJ id=2076431 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
single-stranded-DNA-specific exonuclease RecJ
RIFOXYD12_FULL_OD1_34_57_rifoxyd3_full_scaffold_30_65
RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

comp(69807..70013)
DNA (207bp) protein (69aa)
Tax=RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated
RIFOXYD12_FULL_OD1_34_57_rifoxyd3_full_scaffold_30_66
RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

comp(70052..71833)
DNA (1782bp) protein (594aa)
GTP-binding protein LepA; K03596 GTP-binding protein LepA Tax=RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated
Elongation factor 4 id=2076434 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
GTP-binding protein LepA
RIFOXYD12_FULL_OD1_34_57_rifoxyd3_full_scaffold_30_67
RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

comp(72092..73282)
DNA (1191bp) protein (397aa)
htrA; trypsin-like serine protease/PDZ domain protein Tax=RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated
Serine protease id=2076440 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
Trypsin
RIFOXYD12_FULL_OD1_34_57_rifoxyd3_full_scaffold_30_68
RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

comp(73385..74146)
DNA (762bp) protein (254aa)
id=2076446 Tax=RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated
id=2076446 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
RIFOXYD12_FULL_OD1_34_57_rifoxyd3_full_scaffold_30_69
RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

comp(74174..74647)
DNA (474bp) protein (158aa)
Tax=RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated
RIFOXYD12_FULL_OD1_34_57_rifoxyd3_full_scaffold_30_70
RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

comp(74653..76893)
DNA (2241bp) protein (747aa)
copper amine oxidase-like protein Tax=RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated
Putative copper amine oxidase-like protein id=5800765 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
copper amine oxidase-like protein
RIFOXYD12_FULL_OD1_34_57_rifoxyd3_full_scaffold_30_71
RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

comp(76930..77367)
DNA (438bp) protein (146aa)
D-tyrosyl-tRNA(Tyr) deacylase; K07560 D-tyrosyl-tRNA(Tyr) deacylase [EC:3.1.-.-] Tax=RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated
D-tyrosyl-tRNA(Tyr) deacylase n=2 Tax=Thermosipho africanus RepID=DTD_THEAB
D-tyrosyl-tRNA(Tyr) deacylase
RIFOXYD12_FULL_OD1_34_57_rifoxyd3_full_scaffold_30_72
RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

comp(77475..77807)
DNA (333bp) protein (111aa)
id=2076448 Tax=RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated
id=2076448 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
RIFOXYD12_FULL_OD1_34_57_rifoxyd3_full_scaffold_30_73
RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

comp(78014..79057)
DNA (1044bp) protein (348aa)
pilT; twitching motility protein PilT; K02669 twitching motility protein PilT Tax=RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated
Twitching motility protein id=2076449 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
pilT; twitching motility protein PilT
RIFOXYD12_FULL_OD1_34_57_rifoxyd3_full_scaffold_30_74
RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

comp(79292..80257)
DNA (966bp) protein (322aa)
Ribonuclease H (EC:3.1.26.4)
Ribonuclease H Tax=RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated
Uncharacterized protein id=2178682 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
RIFOXYD12_FULL_OD1_34_57_rifoxyd3_full_scaffold_30_75
RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

comp(80305..80658)
DNA (354bp) protein (118aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2EZC0_9BACT
lipase class 3 Tax=RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated
lipase class 3
RIFOXYD12_FULL_OD1_34_57_rifoxyd3_full_scaffold_30_76
RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

comp(80697..81746)
DNA (1050bp) protein (350aa)
glycosyl transferase family protein Tax=RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated
UDP-GlcNAc:undecaprenyl-P GlcNAc 1-P transferase TagO id=2178680 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
glycosyl transferase family 4
RIFOXYD12_FULL_OD1_34_57_rifoxyd3_full_scaffold_30_77
RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

comp(81807..84554)
DNA (2748bp) protein (916aa)
ATPase; K03696 ATP-dependent Clp protease ATP-binding subunit ClpC Tax=RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated
ATPase AAA-2 domain protein id=2194166 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
ATPase
RIFOXYD12_FULL_OD1_34_57_rifoxyd3_full_scaffold_30_78
RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

comp(84582..84986)
DNA (405bp) protein (135aa)
id=2194164 Tax=RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated
id=2194164 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
RIFOXYD12_FULL_OD1_34_57_rifoxyd3_full_scaffold_30_79
RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists


85715..86002
DNA (288bp) protein (96aa)
50S ribosomal protein L27; K02899 large subunit ribosomal protein L27 Tax=RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated
50S ribosomal protein L27 id=2194135 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
rpmA; 50S ribosomal protein L27
RIFOXYD12_FULL_OD1_34_57_rifoxyd3_full_scaffold_30_80
RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

comp(86203..87822)
DNA (1620bp) protein (540aa)
pyrG; CTP synthetase; K01937 CTP synthase [EC:6.3.4.2] Tax=RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated
pyrG; CTP synthetase (EC:6.3.4.2)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI000380A0F3
RIFOXYD12_FULL_OD1_34_57_rifoxyd3_full_scaffold_30_81
RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists


comp(87930..88373)
DNA (444bp) protein (148aa)
50S ribosomal protein L9 n=1 Tax=Kosmotoga olearia (strain TBF 19.5.1) RepID=RL9_KOSOT
ribosomal protein L9; K02939 large subunit ribosomal protein L9 Tax=RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated
50S ribosomal protein L9
RIFOXYD12_FULL_OD1_34_57_rifoxyd3_full_scaffold_30_82
RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

comp(88444..90870)
DNA (2427bp) protein (809aa)
Tax=RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated
RIFOXYD12_FULL_OD1_34_57_rifoxyd3_full_scaffold_30_83
RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

comp(90965..92152)
DNA (1188bp) protein (396aa)
hypothetical protein Tax=RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated
hypothetical protein id=3610217 bin=GWA2_Elusimicrobia_51_34 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Elusimicrobia_51_34 organism_group=Elusimicrobia
RIFOXYD12_FULL_OD1_34_57_rifoxyd3_full_scaffold_30_84
RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

comp(92260..93144)
DNA (885bp) protein (295aa)
Radical SAM domain protein Tax=RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated
Radical SAM domain protein id=4480761 bin=GWC2_Elusimicrobia_64_44 species=Mitsuokella multacida genus=Mitsuokella taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=GWC2_Elusimicrobia_64_44 organism_group=Elusimicrobia organism_desc=Good
RIFOXYD12_FULL_OD1_34_57_rifoxyd3_full_scaffold_30_85
RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

comp(93349..93810)
DNA (462bp) protein (154aa)
Tax=RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated
RIFOXYD12_FULL_OD1_34_57_rifoxyd3_full_scaffold_30_86
RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

comp(93825..94748)
DNA (924bp) protein (308aa)
Radical SAM domain-containing protein Tax=RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated
Molybdenum cofactor biosynthesis protein A (MoaA) id=3689354 bin=GWA2_Elusimicrobia_51_34 species=Plesiocystis pacifica genus=Plesiocystis taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Elusimicrobia_51_34 organism_group=Elusimicrobia
Radical SAM domain-containing protein
RIFOXYD12_FULL_OD1_34_57_rifoxyd3_full_scaffold_30_87
RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

comp(94753..95694)
DNA (942bp) protein (314aa)
putative Fe-S oxidoreductase Tax=RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated
Radical SAM domain protein id=1892002 bin=GWA2_Elusimicrobia_69_24 species=Clostridium papyrosolvens genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
putative Fe-S oxidoreductase
RIFOXYD12_FULL_OD1_34_57_rifoxyd3_full_scaffold_30_88
RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

comp(95714..96664)
DNA (951bp) protein (317aa)
molybdenum cofactor biosynthesis protein A; K03639 molybdenum cofactor biosynthesis protein Tax=RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated
Molybdenum cofactor biosynthesis protein A (MoaA) id=3689354 bin=GWA2_Elusimicrobia_51_34 species=Plesiocystis pacifica genus=Plesiocystis taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Elusimicrobia_51_34 organism_group=Elusimicrobia
molybdenum cofactor biosynthesis protein A
RIFOXYD12_FULL_OD1_34_57_rifoxyd3_full_scaffold_30_89
RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

comp(96622..96723)
DNA (102bp) protein (34aa)
Tax=RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated
RIFOXYD12_FULL_OD1_34_57_rifoxyd3_full_scaffold_30_90
RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

comp(96674..97633)
DNA (960bp) protein (320aa)
Probable cyclic pyranopterin monophosphate synthase n=1 Tax=Thermogladius cellulolyticus (strain 1633) RepID=I3TG59_THEC1
radical SAM protein Tax=RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated
radical SAM protein
Displaying items 61-90 of 103 in total

View Taxonomy