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ar4r2_scaffold_5567_3

Organism: ALUMROCK_MS4_BD1-5_23_16

near complete RP 48 / 55 MC: 2 BSCG 47 / 51 ASCG 6 / 38
Location: comp(1320..1829)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Caldithrix abyssi DSM 13497 RepID=H1XSZ2_9BACT id=5087824 bin=OP11_3 species=Caldithrix abyssi genus=Caldithrix taxon_order=unknown taxon_class=unknown phylum=unknown tax=OP11_3 organism_group=OP11 (Microgenomates) organism_desc=Complete genome similarity UNIREF
DB: UNIREF100
  • Identity: 39.8
  • Coverage: 171.0
  • Bit_score: 131
  • Evalue 1.10e-27
RNA polymerase, sigma-24 subunit, ECF subfamily Tax=GWF2_OP11_38_9 similarity UNIPROT
DB: UniProtKB
  • Identity: 39.8
  • Coverage: 171.0
  • Bit_score: 130
  • Evalue 1.90e-27
RNA polymerase ECF-type sigma factor similarity KEGG
DB: KEGG
  • Identity: 37.9
  • Coverage: 169.0
  • Bit_score: 118
  • Evalue 2.00e-24

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Taxonomy

GWF2_OP11_38_9 → Pacebacteria → Microgenomates → Bacteria

Sequences

DNA sequence
Length: 510
GTGGCTGAAGAGGAATTGATAAAAAAAATTTTATCTGGAGAAGTAAATCTCTTTGAGAAAATCGTGGATAAATATGAAAGGCGAATATTTGCATATCTTTTAAGGCTTTTAAACTTTCACCAACAAGATGCGGAGGATATAACAAGTCAAGCCTTTATCAAAGCATATATTAATCTAGCCTCTTACAACACAAAGCTTAGTTTTTCTGCATGGATTTATCGCATTGCCCACAATGAAGCTGTGAACCTTATCCATAAGAAATCCAAGAGTTTTGTAGACAACATTGATAATATAACAATAGGTGCTGAATTTGATTTTGACAAACCGAACAAAAATGATCTAGAAAAGATCTTAAATTTACTTAAAGCAGAGGATAAAAATATTTTAATTTTATTTTACTTGGAAGAGAAAACCATCAAAGAGATATCTGATATATTAAAAATTACAGAAGGATCTGTTAAAACTAGATTATCACGAGCAAGAGAAAAAGCCAAAAAATATATAAAATAA
PROTEIN sequence
Length: 170
VAEEELIKKILSGEVNLFEKIVDKYERRIFAYLLRLLNFHQQDAEDITSQAFIKAYINLASYNTKLSFSAWIYRIAHNEAVNLIHKKSKSFVDNIDNITIGAEFDFDKPNKNDLEKILNLLKAEDKNILILFYLEEKTIKEISDILKITEGSVKTRLSRAREKAKKYIK*